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Protein Alignment: Gsc and Poxn
Sequence 1: | NP_001137762.2 |
Gene: | Gsc |
FlyBaseID: | FBgn0010323 |
Length: | 473 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001261016.1 |
Gene: | Poxn |
FlyBaseID: | FBgn0003130 |
Length: | 425 |
Species: | Drosophila melanogaster |
Alignment Length: | 226 |
Identity: | 48/227 (21%) |
Similarity: | 82/227 (36%) |
Gaps: | 61/227 (27%) |
Fly 106 LNSQQCGYLGQRLQSVLQQQHAQHQQSQSQTPSSDDGSQSGVTILEEERRGGAAAASLFTIDSIL 170
|..:..|.....::..||||.. ..|||.....|...|| |..| |:| |.:.
Fly 92 LKEENSGMFAWEIREQLQQQRV-------CDPSSVPSISSINRIL---RNSG-----LWT-DEMT 140
Fly 171 GSRQQ--GGGTAPSQGSHISSNGNQNGLTSNGISLGLKRSGAESPASPNSNSSSSAAASP--IRP 231
.|:|. ....|.:..:|.:.:|..||. |.::|..|.:.:..:.||:| .|.
Fly 141 SSQQNAAAAAAAAAAAAHQAGSGPSNGY------------GGQAPPPPVTVAPPTPAATPSIARY 193
Fly 232 QRVPAMLQH--------------PGLHLGHLAAAAASGFAASPSDFLVAYPNFYPNYMHAAAVAH 282
.:.||::.: |.:..|| :.|...:.|...::|...:.:::...::.:
Fly 194 AKPPALMMNSAGEMPIKPAPKMPPSMGHGH-----SHGLNPNVSGLDLSYSALHKHWLWNPSLLY 253
Fly 283 VAAAQMQAHVSGAAAGLSGH------GHHPH 307
.. |||:...||...|. |:.||
Fly 254 YT----QAHIQAQAAASGGQFLPYAGGYLPH 280
|
Known Domains:
Gene | Sequence | Domain | Region |
External ID | Identity |
Gsc | NP_001137762.2 |
Homeobox |
343..396 |
CDD:278475 |
|
Poxn | NP_001261016.1 |
HTH |
5..133 |
CDD:304362 |
13/51 (25%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
|
|
|
C124281816 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.930 |
|
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