Protein Alignment Gsc and Vsx2

DIOPT Version :9

• Sequence 1: NP_001137762.2
• Gene: Gsc / 33240
• FlyBaseID: FBgn0010323
• Length: 473
• Species: Drosophila melanogaster
• Sequence 2: NP_001284897.1
• Gene: Vsx2 / 31469
• FlyBaseID: FBgn0263512
• Length: 645
• Species: Drosophila melanogaster
• Alignment Length: 311
• Identity: 99/311 - (31%)
• Similarity: 129/311 - (41%)
• Gaps: 97/311 - (31%)

  Fly   162 SLFTIDSILGSRQQGGGTAPSQGSHISSNGNQNGLTSNGISLGLKRSGAESPASPNSN-----SS 221
            |.|.|..:||........||:..:           |:.|.::..:|.....|.:.|:.     :|
  Fly     5 SPFAIQELLGLAVAAATEAPTDLT-----------TTAGATVAKERQTPTPPKTTNATMATAATS 58

  Fly   222 SSAAASPI-----------RPQRVPAMLQHPGLHLGH------------LAAAAASGFAASPSDF 263
            ::.||:|.           .||:.|...|....|  |            :..||||..|...:..
  Fly    59 AATAATPTNAAEGNLTSVSEPQQQPQQQQQEQQH--HQPHHHQYREHHQMTMAAASRMAYFNAHA 121

  Fly   264 LVAYPNFYPNYMHAAAVAHVAAAQMQAHVSGAAAGLSGHGHHPHHPHG--------------HPH 314
            .|| ..|.|:.: ||||.|....|.|.|..          ||||||||              |||
  Fly   122 AVA-AAFMPHQL-AAAVHHHHQHQHQHHPH----------HHPHHPHGAVGGPPPPPPMQHHHPH 174

  Fly   315 HPH--------------------------LGAHHHGQHHLSHLGHGP---PPKRKRRH-RTIFTE 349
            |||                          |.....|...|:..|.||   ..|:|||| |||||.
  Fly   175 HPHHPLLHAQGFPQLKSFAAGAGTCLPGSLAPKDFGMESLNGFGVGPNSKKKKKKRRHSRTIFTS 239

  Fly   350 EQLEQLEATFDKTHYPDVVLREQLALKVDLKEERVEVWFKNRRAKWRKQKR 400
            .|||:||..|.:.|||||..||.|:||.:|.|:|::|||:||||||||.::
  Fly   240 YQLEKLEEAFKEAHYPDVYAREMLSLKTELPEDRIQVWFQNRRAKWRKTEK 290

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gsc	NP_001137762.2	Homeobox	343..396	CDD:278475	33/53 (62%)
Vsx2	NP_001284897.1	Homeobox	233..286	CDD:278475	32/52 (62%)
		OAR	556..570	CDD:281777

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45450971
Domainoid	1	1.000	55	1.000	Domainoid score	I4097
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.840