DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Gsc and phx1

Sequence 1:NP_001137762.2 Gene:Gsc FlyBaseID:FBgn0010323 Length:473 Species:Drosophila melanogaster
Sequence 2:NP_593776.1 Gene:phx1 PomBaseID:SPAC32A11.03c Length:942 Species:Schizosaccharomyces pombe

Alignment Length:303 Identity:66/304 (22%)
Similarity:108/304 (36%) Gaps:99/304 (33%)


  Fly   140 DDGSQSGVTILEEERRGGAAAASL----FTIDSILG----------------SRQQGGGTAPSQG 184
            ::|.|....|...|:|......:|    :.:||.||                ...||....|:..
pombe     8 ENGGQINDNINYSEKRPTMLPENLSLSNYDMDSFLGQFPSDNNMQLPHSTYEQHLQGEQQNPTNP 72

  Fly   185 SHISSNGNQNGLTSNGISLGLKR--------SGAESPASPNSNSSSSAAASPIRPQRVPAMLQHP 241
            ::.....::|       .:..|:        |.|::.:..|.|||.....||::|..|       
pombe    73 NYFPPEFDEN-------KVDWKQEKPKPDAPSFADNNSFDNVNSSKLTNPSPVQPNIV------- 123

  Fly   242 GLHLGHLAAAAASGFAASPSDFLVAYPNFYPNYMHAAAVAHVAAAQMQAHVSGAAAGLSGHGHHP 306
                     .:.|..|.|..:.:|            .|.:...|.:..||.||.           
pombe   124 ---------KSESEPANSKQNEVV------------EATSVEKAKENVAHESGT----------- 156

  Fly   307 HHPHGHPHHPHLGAHHHGQHHLSHLGHGPPPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLRE 371
                     |..|            |....||.|::.   .|.:||..|...|.|...|...:||
pombe   157 ---------PESG------------GSTSAPKSKKQR---LTADQLAYLLREFSKDTNPPPAIRE 197

  Fly   372 QLALKVDLKEERVEVWFKNRRAKWRK-QKREEQERLRKLQEEQ 413
            ::..::::.|..|.:||:|||||.:. .:|:|:||.|.|:|::
pombe   198 KIGRELNIPERSVTIWFQNRRAKSKLISRRQEEERQRILREQR 240

Known Domains:


GeneSequenceDomainRegion External IDIdentity
GscNP_001137762.2 Homeobox 343..396 CDD:278475 18/53 (34%)
phx1NP_593776.1 COG5576 116..272 CDD:227863 45/189 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 avgDist Average_Evolutionary_Distance R6207
TreeFam 00.000 Not matched by this tool.
11.030

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