DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gsc and DMBX1

DIOPT Version :10

Sequence 1:NP_001137762.2 Gene:Gsc / 33240 FlyBaseID:FBgn0010323 Length:473 Species:Drosophila melanogaster
Sequence 2:NP_671725.1 Gene:DMBX1 / 127343 HGNCID:19026 Length:382 Species:Homo sapiens


Alignment Length:200 Identity:70/200 - (35%)
Similarity:104/200 - (52%) Gaps:34/200 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   298 GLSGHGHHPHHPHGHPHHPHLGAHHHGQH--------HLSHLG----------------HGPPPK 338
            |::|:..|..:.....::.|..|....||        |...|.                :|...:
Human     5 GVNGYSLHAMNSLSAMYNLHQQAAQQAQHAPDYRPSVHALTLAERLAGCTFQDIILEARYGSQHR 69

  Fly   339 RKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERVEVWFKNRRAKWRKQKRE-E 402
            ::||.||.||.:|||.||.||.||||||||:||:||:..:|.|.||:|||||||||:||::|. :
Human    70 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQ 134

  Fly   403 QERLRKLQEEQCGSTTNGTTNSSSGTTSSTGNGSLTVKCPGSD-----HYS-AQLVHIKSDPNGY 461
            :|:|:| |:|..||  :|...:.:.|..:..:.....:.||||     |.| ::....:|.|...
Human   135 KEQLQK-QKEAEGS--HGEGKAEAPTPDTQLDTEQPPRLPGSDPPAELHLSLSEQSASESAPEDQ 196

  Fly   462 SDADE 466
            .|.:|
Human   197 PDREE 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GscNP_001137762.2 Homeodomain 341..397 CDD:459649 38/55 (69%)
DMBX1NP_671725.1 Interaction with OTX2 and is required for repressor activity. /evidence=ECO:0000250|UniProtKB:Q91ZK4 1..156 59/153 (39%)
Homeodomain 72..128 CDD:459649 38/55 (69%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 128..252 20/76 (26%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 359..372
Blue background indicates that the domain is not in the aligned region.

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