Sequence 1: | NP_995608.1 | Gene: | rempA / 33230 | FlyBaseID: | FBgn0260933 | Length: | 1503 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006246116.1 | Gene: | Ift140 / 100362124 | RGDID: | 2318759 | Length: | 1475 | Species: | Rattus norvegicus |
Alignment Length: | 1528 | Identity: | 521/1528 - (34%) |
---|---|---|---|
Similarity: | 822/1528 - (53%) | Gaps: | 167/1528 - (10%) |
Fly 1 MTLYFDTKIEFLDSDAVSTISSWHPSEPLFAVASFSPERGGSVTIFADTGEPQRDVTYPVHATSQ 65
Fly 66 ATALCWHPEKALLASGWEHGDIHVWFAGHREFASVNAPHKAAIVLLQFSEQGGRMVTADAMGLVT 130
Fly 131 GWRCD--GQYQFLTMFSHDLREVLLLICFRLTVESEVREEMANLAKAAVAGDENALDTLTNWRPR 193
Fly 194 TAARSMTHSGVRDNHCFYACTQGGVVYYINQGGACVEVMKCGSLPPIVQMLWH-PRKDAVICLME 257
Fly 258 DLTVTLFLVESTGILTELDRVKMSGRGGGRQGGIAWSGNSLAIITGDFFVRIWDIERSDNYLLKM 322
Fly 323 DLPSGNQPGSSMTTLSNGTMSSSNQFFSHDSSESSGVLRKTPKYGQLNGEMFTCLAYSSTGQTLC 387
Fly 388 AGTSQGNVYTWKR-----SGSRLVGAPEDAWQLTNISSVRGAIRSCEWGYNELAKPCMLVNCLSN 447
Fly 448 VFMLKEQPLLAVHTRELWAVQRSAKSVQLTHCS-GREAIVQSEFAVTAMALSELSLVMSNGRSIS 511
Fly 512 SYSLQKVEKSLDEFEEILQTVEGTTPTTESTTTPLSLKLLQTFAAECLALNLCNQNIFCLGSSDV 576
Fly 577 FVYSVGGVVLHRIQASDIEGKIIGMDLSGCYLSVFTMNGYVKAYDVSRHDPKLLFPSKSGHDIFD 641
Fly 642 DFGEFILVKCNSSGSHLAMVIASSNFTPISTLFCWDFERS--NLLEY-----GLL------EPET 693
Fly 694 NA----KKESSTS-LPVRIFWDAEEPRLLATEVKSMIQKTLPQKNSLQPSHFVQSK------VVL 747
Fly 748 LFYS--EKGCLNVLETQSMSPGC--QLLNLCVPNVIRLK-------------------------- 782
Fly 783 ----INTMEEQPLQDFVDLQQCNPVTRKQVLNFSLYVAEGNMDMAYRSIRSIQSKVIWTNLAKMC 843
Fly 844 VHTNRLDVAKVCMGHLEQARSVRALRQAIEDDDLETEAKVAVLAIELGMIEEAKDLYRRCKRFDL 908
Fly 909 LNKLLQSIGHLDEAVELAEAEDRIHLKHTYYQKAQELRERGDIKGALEYFEKTQNPAQNITQLLL 973
Fly 974 ENPGAMKRYIQTTSDPKLLKWWGQYIESSGDMDAALAVYHKAEDWFSQVKILCYLGKISKADAIA 1038
Fly 1039 RQSGDRAACYHLARHYENVGKFQEAIMFFTRAQTFSNAIRICKENDFQEELWTVASSSRQRDKAI 1103
Fly 1104 AAAYFEECG-NFKHAVELYHRAGMLHKALEMAFESQQPEILEIIASDLAPDSDAELINRCADFFC 1167
Fly 1168 SIEQFQKAVHLLAKTRHLERALGICSEKGVPVTEELSEMLTPEKG--EFEEATRVHILVQLGEFL 1230
Fly 1231 QQQGDYHSATKKFTQAGDKIRAMKSLLKSGNTDKIIFFANMSRQREVYIMAANYLQALDWQSDPQ 1295
Fly 1296 VLKHIVTFYTKGQAFDSLANFYAICAQIEIEEFQDYGKALTAMQEASKCLEKLSHAQHVYN---- 1356
Fly 1357 --NLQRTVADVKAILEIQQALREGDHQLVIGSCRSMLIKPEL-PPIRHAHILAMLIRALVYVKDY 1418
Fly 1419 SEAGRALKELTVKDSTWSASGLLDRSIVHKIAQ 1451 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rempA | NP_995608.1 | WD40 | <14..123 | CDD:295369 | 41/108 (38%) |
WD40 repeat | 67..103 | CDD:293791 | 14/35 (40%) | ||
WD40 | 71..480 | CDD:225201 | 114/416 (27%) | ||
WD40 repeat | 108..144 | CDD:293791 | 12/37 (32%) | ||
WD40 repeat | 153..202 | CDD:293791 | 20/48 (42%) | ||
WD40 repeat | 222..276 | CDD:293791 | 11/54 (20%) | ||
WD40 repeat | 288..312 | CDD:293791 | 5/23 (22%) | ||
TPR | 860..1070 | CDD:223533 | 96/209 (46%) | ||
BRO1_Alix_like | <901..1110 | CDD:301330 | 92/208 (44%) | ||
TPR repeat | 937..973 | CDD:276809 | 11/35 (31%) | ||
TPR repeat | 988..1039 | CDD:276809 | 25/50 (50%) | ||
TPR repeat | 1044..1070 | CDD:276809 | 12/25 (48%) | ||
Ift140 | XP_006246116.1 | WD40 | <15..139 | CDD:295369 | 47/125 (38%) |
WD40 repeat | 19..57 | CDD:293791 | 18/39 (46%) | ||
WD40 repeat | 64..101 | CDD:293791 | 15/36 (42%) | ||
WD40 | 86..437 | CDD:225201 | 107/403 (27%) | ||
WD40 repeat | 108..160 | CDD:293791 | 15/51 (29%) | ||
tRNA_int_end_N2 | <455..506 | CDD:289680 | 13/78 (17%) | ||
TPR | 844..1104 | CDD:223533 | 122/261 (47%) | ||
TPR repeat | 909..939 | CDD:276809 | 13/29 (45%) | ||
TPR repeat | 970..996 | CDD:276809 | 13/25 (52%) | ||
TPR repeat | 1023..1049 | CDD:276809 | 12/25 (48%) | ||
Nic96 | <1059..1240 | CDD:282017 | 78/180 (43%) | ||
RNase_H_like | 1179..>1294 | CDD:301345 | 61/114 (54%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | C22534415 | |||
eggNOG | 1 | 0.900 | E1_KOG3617 | |||
Hieranoid | 1 | 1.000 | ||||
Homologene | 1 | 1.000 | H40979 | |||
Inparanoid | 1 | 1.050 | 819 | 1.000 | Inparanoid score | I434 |
OMA | 1 | 1.010 | ||||
OrthoDB | 1 | 1.010 | D149441at33208 | |||
OrthoFinder | 1 | 1.000 | FOG0005918 | |||
OrthoInspector | 1 | 1.000 | T1086781 | |||
orthoMCL | 1 | 0.900 | OOG5_130315 | |||
Panther | 1 | 1.100 | LDO | PTHR15722 | ||
Phylome | 1 | 0.910 | 0.667 | Consistency score | ||
TreeFam | 1 | 0.960 | ||||
13 | 12.770 |