Sequence 1: | NP_476708.1 | Gene: | RpI135 / 33210 | FlyBaseID: | FBgn0003278 | Length: | 1129 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_014850.1 | Gene: | RET1 / 854382 | SGDID: | S000005733 | Length: | 1149 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 1207 | Identity: | 336/1207 - (27%) |
---|---|---|---|
Similarity: | 531/1207 - (43%) | Gaps: | 205/1207 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 19 PEFKQIPKKLSRHLANLGGPHVDSFDEMLTVGLDN--SAKHMIPNHWLSPAGEKISMKVESIWIA 81
Fly 82 KPKVPQDVIDVRTREIYPTDSRQLHVSYSGMCSVRLGWSVNGVQKTPINMDLGEVPIMLRSKACN 146
Fly 147 LGQATPEEMVKHGEHDSEWGGIFVIRGNEKIVRMLIMTRRNHPICVKRSSWKDRGQNFSDLGMLV 211
Fly 212 QTVREDESSLSNVVH------YLNNGTAKFMFSHVKRLSYVPVCLILKCLMDYTDEEIYNRLVQG 270
Fly 271 YESDQYYVSCVQAMLREVQNENVYTHAQCKSFIG----NLFRARFPEVPEWQPDDDVTDFILRE- 330
Fly 331 ------RVMIHLDT----YEDKFQLIVFMIQKLFQCAQGKYKVENVDSAMMQEVLLPGHLYQKYL 385
Fly 386 SERVESWVSQVRRCLQKKLTSP------DALVTSAVMTQCMRQAGGVGRAIESFLATGNIASRTG 444
Fly 445 LGLMQNSGLVIMAENINRMRYMSHFRAIHR-GSYFTTMRTTEA-RQLLPDAWGFICPVHTPDGTP 507
Fly 508 CGLLNHLTLTCEISMRPDPKLVKAI-------PKHLIDMGMMPLSNRRYLGEKLYVVFLDGKHLG 565
Fly 566 HIHQSEAEKIVDELRYGKIFGTLPQMMEIGFIPFKKNGQFPGLYIATGPARMMRPVW-------- 622
Fly 623 ------------------NLKWKRVEYIGTLEQLYMEIAIDAKEMYPDFTTHLELAKTHFMSNLA 669
Fly 670 NLIPMPDYNQSPRNMYQCQMGKQTMGTPCLNWPKQAANKLYRLQTPGTPLFRPVHYDNIQLDDFA 734
Fly 735 MGTNAIVAVISYTGYDMEDAMIINKAAYERGFAYGSIYKTKFLTLDKKSSYFARHP-HMPELI-- 796
Fly 797 -------------KHLDTDGLPHPGSKLSYGSPLYCYFDGEVATYKV---------VKMDEKEDC 839
Fly 840 IV------ESIRQ-LGSFDLSPKKMVAITLRVPRPATIGDKFASRAGQKGICSQKYPAEDLPFTE 897
Fly 898 SGLIPDIVFNPHGFPSRMTIAMMIETMAGKGAAIHGNVYDATPFRFSEENTAIDYFGKMLEAGGY 962
Fly 963 NYYGTERLYSGVDGREMTADIFFGVVHYQRLRHMVFDKWQVRSTGAVEARTHQPIKGRKRGGGVR 1027
Fly 1028 FGEMERDALISHGAAFLLQDRLFHNSDKTHTLVCHKCGSILAPLQRIVKRNETGGLSSQPDTCRL 1092
Fly 1093 CGDNSSVSMIEIPFSFKYLVTELSSVNINARFKLNEI 1129 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RpI135 | NP_476708.1 | RpoB | 34..1128 | CDD:223163 | 331/1189 (28%) |
RNA_pol_B_RPB2 | 35..1125 | CDD:238353 | 330/1185 (28%) | ||
RNA_pol_Rpa2_4 | 564..614 | CDD:284335 | 12/49 (24%) | ||
RET1 | NP_014850.1 | RpoB | 26..1147 | CDD:223163 | 336/1207 (28%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0085 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000346 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |