DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tbc1d15-17 and AT2G19240

DIOPT Version :9

Sequence 1:NP_001259806.1 Gene:Tbc1d15-17 / 33184 FlyBaseID:FBgn0031233 Length:715 Species:Drosophila melanogaster
Sequence 2:NP_001324927.1 Gene:AT2G19240 / 816441 AraportID:AT2G19240 Length:845 Species:Arabidopsis thaliana


Alignment Length:488 Identity:95/488 - (19%)
Similarity:152/488 - (31%) Gaps:193/488 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   352 QTPDGRI---SDSARIKELIFRG-------GVVQSLRPEVWKF------------LLNYYLWSDT 394
            |.|.|.:   .:..|...|  ||       ||:.||...:.:|            ||...|..|.
plant    11 QEPSGSLVLSREDRRFANL--RGVRWRVNLGVLPSLASSIDEFRRAAANSRRRYALLRRRLLMDP 73

  Fly   395 HVERIERRKQKSI----EYYNMKAQWLAMTTTQEANFCGYRERKCQIEKDVKRTDRSLQFFAGE- 454
            ||.:.|......|    ...|..:.|            |...|..::||.:   |:.|.....| 
plant    74 HVLKHEDSSPNFIIDNPLSQNPNSTW------------GQFFRNAELEKTL---DQDLSRLYPEH 123

  Fly   455 ----DNPNLT-LLQGILMTYVMYNFDLGYVQGMSDLLAPILEI------QVNEV---------DT 499
                ..|... :|:.||:.:.:.:.:.||.|||.:||||:|.:      :::||         |.
plant   124 WCYFQTPRYQGMLRRILLLWCLKHPEYGYRQGMHELLAPLLYVLHVDIMRLSEVRKSYEDYFTDR 188

  Fly   500 F-------------WCFVGFMELV------------FTNFD------------IDQAGMKTQFAQ 527
            |             :.|..||:.|            |.:.|            .|..|.:::...
plant   189 FDSLSFMERDITYTFDFNKFMDSVDNGIGSQGHSKNFNSLDELDPEVQSLVMLTDSYGTESELGI 253

  Fly   528 I--RRLIE-----------------FANAPLFNY------------------------------M 543
            :  .:.:|                 ||.|..|:|                              :
plant   254 VLSEKFMEHDAYCMFDALMSGIHGCFAMASFFSYSPASGSHTGLTPVLEACSAFYRILAVVDSSL 318

  Fly   544 RSH----DSDNMYFCFRWLLVWYKRELNSEDVLKLWECL-----------------WTRLPCPNF 587
            .||    ..:..||..|||.|.:.||...:|:|.:|:.:                 :....||..
plant   319 HSHLVELGVEPQYFGLRWLRVLFGREFLLQDLLLVWDEIILADNSARTDEDSRNQNFRIFDCPRG 383

  Fly   588 HLLFSVAI-LDQETRVIIDSQYEFTEILKHVNELSGNIDVQKTLQVAE----------------- 634
            .|:..:.: :....|..:.|....|..|:.:.....|||:.|.:|.|:                 
plant   384 TLVLGMTVSMILYLRSSLLSTENATCCLQRLLNFPENIDLNKIIQKAKLLQALVLDTDMLSALSI 448

  Fly   635 -GIYLQLKGSETLPNDIRSIIGEPLLPAAAGEE 666
             |::.|   |..:|...:|....|..|.....|
plant   449 NGVFDQ---SNFVPARTKSCSTSPRSPLIIAPE 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tbc1d15-17NP_001259806.1 DUF3548 37..>191 CDD:192931
TBC 369..598 CDD:214540 72/380 (19%)
AT2G19240NP_001324927.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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