DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tbc1d15-17 and tbc1d16

DIOPT Version :9

Sequence 1:NP_001259806.1 Gene:Tbc1d15-17 / 33184 FlyBaseID:FBgn0031233 Length:715 Species:Drosophila melanogaster
Sequence 2:XP_012814267.2 Gene:tbc1d16 / 448159 XenbaseID:XB-GENE-986691 Length:727 Species:Xenopus tropicalis


Alignment Length:715 Identity:179/715 - (25%)
Similarity:289/715 - (40%) Gaps:143/715 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SSVEEDVQNLPQQG------TGNILFTHDGVLLKKASAEHIADLNTSGSLSLVEYSRSIAEMPRR 82
            ||...|...|...|      .|.|:|:.:.|.:.  ..|.:.|:.:.....|..|... .|....
 Frog    11 SSKASDFLTLSSGGGSSSILDGEIIFSKNNVCVH--PPELLQDVGSHHPGYLCVYMEK-DEFLGT 72

  Fly    83 RLLLEWQPNDSIMIADDSQDQGDWALVDRISGRTRTTSECRAFNTRPIEPSGGATTRSRVMRAQL 147
            .|:|.|.||..|    ..||:.....:...|...|.....|  |.:|  |....||||:......
 Frog    73 TLILAWVPNSRI----QRQDEEALRYITPESSPIRKNPRKR--NRQP--PGSAPTTRSKPAIISK 129

  Fly   148 EDLSS------------------VEVRHRGQTIRFMRKGANGV---------------------- 172
            ||:..                  .|...:|:..|.:...::.|                      
 Frog   130 EDVGREVNSPTERDPSYGSAEGVEEGTEQGEDERSLDLSSDEVSKDSTLDSDSDAFSSPFCLSPI 194

  Fly   173 -------HSEFFFQHGNADLFVRSMRD--QHLIENAETSRSGGEVYAILTTENQK---LKKTFA- 224
                   .|..|.::.|.|.....|..  ..|..|::.....|:.......|.||   |::|.. 
 Frog   195 SEALGESSSSVFLENENRDESNSHMSSYASSLNANSQLPEINGQGVPAKWEEQQKLLALEQTCGV 259

  Fly   225 -ELDIGQIKASQLPRESWLPNKLAGILGNIPDYVQPPFQRSPKSRPGVLISGDRQTSPDNYQIIG 288
             .:|:||:::.:.                        |........|.|:...|::   .|::..
 Frog   260 FRVDLGQMRSLRF------------------------FFSDEACTSGQLVVASRES---QYKVFH 297

  Fly   289 LSGSTNSACSSNGQSRGGSAEKSPA--------DSELETLNAQDEKIV-------NNLPDRQRVE 338
            .             ..||..:.|..        :::|:.....::|..       .|||..:   
 Frog   298 F-------------HHGGLGKLSEVFQQWKYCRETQLKEQQVTEDKTCLHFSIQRPNLPSSE--- 346

  Fly   339 RGHP-------LTETQWLEFQTPDGRISDSARIKELIFRGGVVQSLRPEVWKFLLNYYLWSDTHV 396
             .||       |..|.|||.....|::.:..::::|||.||:..|||.|||.|||.||.|..|..
 Frog   347 -SHPEEGMYRRLDVTSWLEHLNEVGQVEEEYKLRKLIFFGGIDPSLRGEVWPFLLGYYPWEITSE 410

  Fly   397 ERIERRKQKSIEYYNMKAQWLAMTTTQEANFCGYRERKCQIEKDVKRTDRSLQFFAGEDNPNLTL 461
            :|...|..:..||..::.:.::|:.|.:..|  ::..:..::|||.|||||.|||.||||||:..
 Frog   411 DREALRVHRREEYSQIQKKRVSMSPTAQKEF--WKNVQFTVDKDVVRTDRSNQFFRGEDNPNVES 473

  Fly   462 LQGILMTYVMYNFDLGYVQGMSDLLAPILEIQVNEVDTFWCFVGFME-LVFTNFDIDQAGMKTQF 525
            ::.||:.|.:|:..:||.||||||:||||...::|.||||||||.|: .:|.:...|:. |:.|.
 Frog   474 MRRILLNYAVYSPGVGYSQGMSDLVAPILAEVLDESDTFWCFVGLMQNTIFISSPRDEY-MEKQL 537

  Fly   526 AQIRRLIEFANAPLFNYMRS--HDSDNMYFCFRWLLVWYKRELNSEDVLKLWECLWTRLPCPNFH 588
            ..:|.|:...:...:.::.|  .|...|.||.||:|:.:|||....:.|::||..|.......||
 Frog   538 LYLRELLRLVHPRFYQHLYSLGEDGLQMLFCHRWILLCFKREFPDSEALRMWEACWAHYQTDYFH 602

  Fly   589 LLFSVAILDQETRVIIDSQYEFTEILKHVNELSGNIDVQKTLQVAEGIYLQLKGSETLPNDIRSI 653
            |...|||:......:|:.|....::|.|.:.|:.:::.:..|:.|..:..|.:....:|..:..:
 Frog   603 LFLCVAIIVLYGDDVIEQQLPTDQMLLHFSNLAMHMNGELVLRKARSLLYQFRLLPRIPCSLHDL 667

  Fly   654  653
             Frog   668  667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tbc1d15-17NP_001259806.1 DUF3548 37..>191 CDD:192931 38/206 (18%)
TBC 369..598 CDD:214540 93/231 (40%)
tbc1d16XP_012814267.2 TBC 385..613 CDD:214540 92/230 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1495285at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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