DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tbc1d15-17 and tbc1d9b

DIOPT Version :9

Sequence 1:NP_001259806.1 Gene:Tbc1d15-17 / 33184 FlyBaseID:FBgn0031233 Length:715 Species:Drosophila melanogaster
Sequence 2:XP_009305930.1 Gene:tbc1d9b / 100332046 -ID:- Length:1218 Species:Danio rerio


Alignment Length:782 Identity:158/782 - (20%)
Similarity:256/782 - (32%) Gaps:239/782 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 DVQNLPQQGTGNILFTHDGVLLKKASAEHIAD--LNTSGSLSLVEYSRSIAEMPRRRLLLEWQPN 91
            ||..|.:..|   |...:.:.:.....||...  ||.:.:..|:|   .:|.:..|:||    .|
Zfish   201 DVTQLDKNAT---LVFPESIRVSTRDTEHFFSMFLNINETFKLME---QLANIAMRQLL----DN 255

  Fly    92 DSIMIADDSQDQGDWALVDRISGRTRTTSECRAFNTRPIEPSGGATTRSRVMRAQLEDLSSVEVR 156
            :| ..||.|..:.....:..:|...|.. :.||.|.|         .|:.....|.|.|..    
Zfish   256 ES-FAADRSLPKPANKTLKNVSALKRDL-DARAKNER---------YRALFRLTQDERLDG---- 305

  Fly   157 HRGQTI--RFMRKGANG---VHSEFF-FQHGNADL--FVRSMRDQHLIENAETSRSGGEVYAILT 213
            |...|:  .|.:....|   |.:.:. |.....||  .:..:|:..::|.|::|.......:|.|
Zfish   306 HTDCTLWTPFAKMHVVGQMFVSNNYICFTSREEDLCQLIIPLREVTIVEKADSSSVLPSPLSIST 370

  Fly   214 TENQKLKKTFAELDIGQIKASQLPRESWLPNKLAGILGNIPDYVQPPFQRSPKSRPGVLISGDRQ 278
                |.|.||.        .:.|....:|..:::..|           ||:|....|||.|.:..
Zfish   371 ----KNKMTFL--------FANLKDRDFLVQRISDFL-----------QRTPDGPCGVLQSENPS 412

  Fly   279 TS-PDNYQIIGLSGSTNSACSSNGQSRGGSAEKSPADSELETLNAQDEKIVNNLPDRQRVERGHP 342
            .| |.:..::.||.|        .|.:..|.....|...|..:..||  :...|..:...||   
Zfish   413 PSTPPSPPVLSLSES--------AQMQHYSPSLPTARKGLLQIYQQD--VPEELGPKVTRER--- 464

  Fly   343 LTETQW----LEFQTPDGR---ISDSARIKELIFRGGVVQSLRPEVWKFLLNYYLWSDTHVERIE 400
            :.|..|    .||    ||   :..:::.:||:. .|:.:|||.|:|...........||.    
Zfish   465 MKEESWKIHFFEF----GRGVCMYRTSKTRELVL-NGIPESLRGELWLLFSGAQNEMATHP---- 520

  Fly   401 RRKQKSIEYY-NMKAQWLAMTT--TQEANFCGYRERKCQIEKDVKRTDRSLQFFAGEDNPNLTLL 462
                   .|| |:..|.:...|  |:|            ||:|:.|:  ..:..|.::...:..|
Zfish   521 -------GYYGNLVEQAMGRCTLATEE------------IERDLHRS--MPEHHAFQNETGIAAL 564

  Fly   463 QGILMTYVMYNFDLGYVQGMSDLLAPILEIQVNEVDTFWCFVGFMELVFTNFD--------IDQA 519
            :.:|..|...|..:||.|.| :::..:|.:...|.:.||..|...|.:..::.        :||.
Zfish   565 RRVLTAYAYRNPGIGYCQAM-NIVTSVLLLYCTEEEAFWLLVALCERMLPDYYNTRVVGALVDQG 628

  Fly   520 GMKTQFAQIRRLIEFANAPLFNYMRSHDSD---NMYFCFRWLLVWYKRELNSEDVLKLWECLW-- 579
                .|.::.|    ...||   :..|..|   .......|.|..:...:..:..:.|.:|.:  
Zfish   629 ----VFEELTR----ECLPL---LYEHMQDLGVISTISLSWFLTLFLSVMPFDSAVLLVDCFFYE 682

  Fly   580 ------------------------------TRL---------------PCPNFHLL--------- 590
                                          |.|               |.|:.|.|         
Zfish   683 GIKVIFQVSLAVLHANMDQLLSCSDEGEAMTILGRYLDNVVNKQTVSPPIPHLHALLTSGNNPPP 747

  Fly   591 ----FSVAILDQE----TRVIIDSQYEFTEILKHVNELSGNIDVQK-------------TLQVAE 634
                |.:.....|    .|..:..|..|.:.||.:..|.   |..|             |::..|
Zfish   748 EIDVFELIKASYEKFGSLRADVIEQMRFKQRLKVIQSLE---DTAKRSVVRAIMTESAFTIEELE 809

  Fly   635 GIYLQLK---------GSETLPNDIRSIIGEPLLPAAAGEEIDGGMVDEEPTYSDDGFDELVKEL 690
            .:|:..|         |:.:.|.:..    :|.||......||.|.           |.:|...|
Zfish   810 ELYVLFKAKHIMSCYWGASSTPAERH----DPSLPYLEQYRIDCGQ-----------FVQLFSAL 859

  Fly   691 TP 692
            .|
Zfish   860 AP 861

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tbc1d15-17NP_001259806.1 DUF3548 37..>191 CDD:192931 35/163 (21%)
TBC 369..598 CDD:214540 53/302 (18%)
tbc1d9bXP_009305930.1 PH-GRAM1_TCB1D9_TCB1D9B 153..251 CDD:275420 12/55 (22%)
PH-GRAM2_TCB1D9_TCB1D9B 300..395 CDD:270161 22/110 (20%)
TBC 493..703 CDD:214540 46/247 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.