DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11454 and rbm7

DIOPT Version :10

Sequence 1:NP_608497.1 Gene:CG11454 / 33175 FlyBaseID:FBgn0031224 Length:238 Species:Drosophila melanogaster
Sequence 2:NP_956219.1 Gene:rbm7 / 334784 ZFINID:ZDB-GENE-030131-6724 Length:252 Species:Danio rerio


Alignment Length:248 Identity:72/248 - (29%)
Similarity:106/248 - (42%) Gaps:86/248 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 DEEQRTLFCGNLDERVTEEILYEVFLQAGPIEGVRIPTDNNGRPRNFGFVTYQRLCAVPFALDLY 130
            ||..||||.||||.:||||:::|:||||||:..|:||.:|.|:.:.|.||.::...:||:||:|.
Zfish     5 DEADRTLFVGNLDPQVTEEVIFELFLQAGPLIKVKIPKNNEGKSKLFAFVNFKHEVSVPYALNLL 69

  Fly   131 QGLELFQKKVTIK----------------------------QQGGK----------------QLP 151
            .|:.|..:::.||                            .:||:                |.|
Zfish    70 NGIRLHGRQLNIKFKTGSSHINQEGKSPANSQNPSPANTPGHRGGRTPEQMGSPSYSPPQHMQRP 134

  Fly   152 AYNQSRLRNQFMM-------------------EALPQP--------SPLRHARHSLHNGKPYDRN 189
            ..:...|:.|.||                   :.:.||        |..|..|||     |.|.|
Zfish   135 FSSPDTLQRQAMMNNMWQVQMQQLQMLSGTFQQGMQQPRGNADGGWSGHRGQRHS-----PQDNN 194

  Fly   190 PFGHNA-DQRRRSDSSVMERNRLKPQQ----HHQHMQGGSRRS---DQRSNNK 234
              .|.. |||..:.::..||||...|:    ||....||..|:   |:|.:::
Zfish   195 --NHQGRDQRHGNGANNYERNRRDGQRGDFYHHDDRSGGHNRNYPPDRRRDSR 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11454NP_608497.1 RRM_RBM7_like 69..143 CDD:409773 34/73 (47%)
rbm7NP_956219.1 RRM_RBM7 8..82 CDD:410005 34/73 (47%)
PABP-1234 <11..195 CDD:130689 52/190 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 88..137 4/48 (8%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 171..252 26/82 (32%)
PRK12678 <171..>248 CDD:237171 26/82 (32%)

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