DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(2)gl and SRO77

DIOPT Version :10

Sequence 1:NP_523439.2 Gene:l(2)gl / 33156 FlyBaseID:FBgn0002121 Length:1161 Species:Drosophila melanogaster
Sequence 2:NP_009444.2 Gene:SRO77 / 852168 SGDID:S000000202 Length:1010 Species:Saccharomyces cerevisiae


Alignment Length:1239 Identity:227/1239 - (18%)
Similarity:392/1239 - (31%) Gaps:461/1239 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LQKDLFAYRKTAQHGFPHKPSALAYDPVLKLMAIGTQTGALKVFGQPGVELYGQHTLLNNSASEL 83
            :....|..:|...:|...:.:...:|....|:|:.|..|.:.|:||..:|:.   ..|.|.....
Yeast    27 INSKFFDTKKICTYGINGRITVTTFDYTQSLLAVATTAGEIHVYGQKQIEVV---FTLKNRPQIK 88

  Fly    84 NVQLLEWVYGTGRILSLTAANQLILWEPVGATLLPIKTLPFDGKLKKVSSLCC---SLSKDLLWI 145
            :::.::.:|    ::::...:.:|:.......:|.....|        :|:.|   ..|.|.:.|
Yeast    89 HMRFIKGIY----LIAVDEKSNIIVLSVHSKQILTTVFCP--------NSITCIETDPSLDWMLI 141

  Fly   146 GTEGGN--IYQLDLHTFT-IKEPVIYHDVVLEQVPPAYKLNPGAIESIRQLPNSPSKLLVAYNRG 207
            |.|.|:  ||.:|.:..: :|.......|.|    |..:|:|  :.||:..|.....:|::|.. 
Yeast   142 GLESGSILIYDVDRNQMSKLKIENFQKSVFL----PKERLSP--VISIQWNPRDIGTILISYEH- 199

  Fly   208 LCVLWDFESASVQRAYI------APG--------------------HGQSVG-LTVNFEGSEFTW 245
            :.|::.|....|::.:.      |||                    |..|:. |||:.:.|...|
Yeast   200 ITVIYSFIDYKVKQHFFYQLEPYAPGGDLSTNIEKKRTPKVIQSLYHPNSLHILTVHEDNSLVFW 264

  Fly   246 -------YHA----------------DGSY------------------------ATWSIDNPEPP 263
                   .||                |.|:                        ||.:.:||..|
Yeast   265 DVNSGKLIHARSIFETHVNFPNPALKDCSFTETPAIFKVSWLCQRNPEYTSLLIATKATENPCLP 329

  Fly   264 SNVNYVPYGPDPCKSINRL-----YKGKRRSNDVIVFSGGMP---------RSAY----GDHNCV 310
            ..:..:..|..|..|:...     |..|.....:....|..|         .|.|    .|.|.:
Yeast   330 QEITMIDLGGTPMYSVTSFDAMSKYYAKPVQQKLFSLIGKAPLINFLPLPKASPYFGGCHDTNLI 394

  Fly   311 SVHASDGHKVCL-----DFTSKVIDFFVTFENNRDVAEVLVVLLEEELCAYDLTDPNICAIKAPY 370
            .:...||....|     .|:||...|                             |...|...|.
Yeast   395 LLLLEDGELETLIYPAGSFSSKASIF-----------------------------PRSLAWVRPT 430

  Fly   371 LHSVHASAVTCNYLASEVVQSVYESILRAGDEQDIDYSNISWPITGGTLPDNLEESVEEDATKLY 435
            :.:..|.:|..|.....:..:..||.|:.|           .|.|         .::....|:  
Yeast   431 VTTCIAQSVQKNLWLGMMTIAQSESFLKGG-----------IPAT---------RNIRRHETR-- 473

  Fly   436 EILLTGHEDGSVKFWDCTGVLLKPIYNFKTSSIFGSESDFRDDAAADMSAEQVDEGEPPFRKSGL 500
            ..|||||.:|||:.||                  .|.|:..|:|..:::..:|            
Yeast   474 SALLTGHSNGSVRIWD------------------ASHSEVTDNAVFEVNTAKV------------ 508

  Fly   501 FDPYSDDPRLAVKKIAFCPKTGQLIVGGTAGQIVIADFI------DLP--EKVSLKYISMNL--- 554
               .:....||:|.|:|..:|.:|.|....|.:::..|.      .||  :.:.||:...:|   
Yeast   509 ---LNRATNLAIKNISFASETLELAVSSEVGDVILFKFETNKFYGQLPKSDALQLKFSRFSLDDS 570

  Fly   555 ------VSDRDGFVWKGHDQLNVRSNLLDGEAIPTT----ERGVNISGVLQVLPPASITCMALEA 609
                  ||||        ...||:...     ||:|    ::|. :|.:             :.:
Yeast   571 KTILVDVSDR--------GPTNVKQGF-----IPSTVIHAKKGA-VSAI-------------MNS 608

  Fly   610 SWGLVSGGTAHG-LVLFDFKNFVPVFHRCTLNPNDLTGAGEQLSRRKSFKKSLRESFRKLRKGRS 673
            :.|.|:.|...| |::.|.:....:|:                           |:.|.:.|..|
Yeast   609 NIGFVAVGFIEGTLIILDRRGPAIIFN---------------------------ENIRVISKAGS 646

  Fly   674 TRTNQSNQVPTTLEARPVERQIEARCADDGLGSMVRCLLFAKTYVTNVNITSPTLWSATNASTVS 738
            :..       :|:....:|      ..|||..|::                   :...|:...:.
Yeast   647 SYV-------STVHFCVME------YGDDGFSSIL-------------------MLCGTDIGELM 679

  Fly   739 VFLLHLPPAQTAATAVPSASGNAPPHMPRRISAQLAKEIQLKHRAPVVGISIFDQAGSPVDQLNA 803
            .|.:           :|:.:|        |...:.....:..::..::||:.|           |
Yeast   680 TFKI-----------LPATNG--------RFEVKFTDATKTNNQGKILGINSF-----------A 714

  Fly   804 GENGSPPHRVLIASEEQFKVFSLPQLKPINKYKLTANEGARIRRIHFGSFSCRISPETLQSMHGC 868
            .:.|......:...:...|..::|....|:    .||:   ||.:                    
Yeast   715 KDTGYSCSATISKMQGLSKGIAIPGFVTIS----GAND---IRLV-------------------- 752

  Fly   869 SPTKSTRSHG-----------------DGEADPNISGSLAVSRGDVYNETALICLTNMGDIMVLS 916
            ||.||..:|.                 ||:.:..:|             |.:|.|...|||.||:
Yeast   753 SPGKSKDTHALFKYPIATSGLSFIPIIDGKGERKLS-------------TIMIVLLINGDIKVLT 804

  Fly   917 VPELKR--------QLNAAAVRREDI--NGVSSLCFTNSGEALYMMSSSELQRIALATSRVVQPT 971
            |||||.        .|:|..|....|  || ..:..|...:|..:   |.|...|..|:.....:
Yeast   805 VPELKEVKNLRCPVPLSAQYVENSSILENG-DIVIRTGKFQASLI---SVLNESATGTNHTADIS 865

  Fly   972 GVVPVEPLENEESVLEENDAENNKE---------TYACDEVV-------NTYEIKNPSGISI-CT 1019
            ...|::.|.|.:..:......|:.:         .|..||::       :.||   .|.|:. |.
Yeast   866 QHTPIDTLYNPDLKIGYRPQVNSLQWARGTIYCTPYQLDELLGGIERPESKYE---ESAIARGCI 927

  Fly  1020 RPAEENVGR---------------NSVQQVNGVNISNSPNQANETISSSIGDITVDSVRDHLNMT 1069
            ..:..|..|               .|..:.||..:..|.::|.||        .:|:|...:|..
Yeast   928 SSSSSNAARKLPPGTEDHRYARPVRSSGRSNGYGVLKSVSRAIET--------RLDTVETTINDY 984

  Fly  1070 TTTL 1073
            .||:
Yeast   985 ATTM 988

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)glNP_523439.2 WD40 repeat 39..78 CDD:293791 10/38 (26%)
WD40 repeat 84..126 CDD:293791 4/41 (10%)
WD40 repeat 131..174 CDD:293791 13/48 (27%)
WD40 repeat 188..224 CDD:293791 8/35 (23%)
LLGL 268..>338 CDD:462446 18/92 (20%)
SRO77NP_009444.2 WD40_like <48..>151 CDD:407205 23/117 (20%)
WD40 repeat 88..122 CDD:293791 3/37 (8%)
WD40 repeat 127..167 CDD:293791 11/39 (28%)
WD40 repeat 180..233 CDD:293791 11/53 (21%)
WD40 repeat 240..264 CDD:293791 6/23 (26%)
Lgl_C 514..916 CDD:400768 100/561 (18%)

Return to query results.
Submit another query.