DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)gl and Stxbp5

DIOPT Version :10

Sequence 1:NP_523439.2 Gene:l(2)gl / 33156 FlyBaseID:FBgn0002121 Length:1161 Species:Drosophila melanogaster
Sequence 2:NP_848035.1 Gene:Stxbp5 / 81022 RGDID:708517 Length:1152 Species:Rattus norvegicus


Alignment Length:1148 Identity:298/1148 - (25%)
Similarity:468/1148 - (40%) Gaps:311/1148 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 QQPSADR-----HRLQKDLFAYRKTAQHGFPHKPSALAYDPVLKLMAIGTQTGALKVFGQPGVEL 69
            |.|..:|     ..||.:.|...||.:||||::|||||:|||.|::|:|||||||::||:||||.
  Rat    28 QHPPGNREPEIQETLQSEHFQLCKTVRHGFPYQPSALAFDPVQKILAVGTQTGALRLFGRPGVEC 92

  Fly    70 YGQHTLLNNSASELNVQLLEWVYGTGRILSLTAANQLILW---EPVGATLLPIK---------TL 122
            |.||   ::.|:.:.:|.|   ...|.::|..|.:.|.||   :...|.|..:|         .|
  Rat    93 YCQH---DSGAAVIQLQFL---INEGALVSALADDTLHLWNLRQKRPAVLHSLKFCRERVTFCHL 151

  Fly   123 PFDGKLKKVSSLCCSLSKDLLWIGTEGGNIYQLDLHTFTIKEPVIYHDVVLEQVPPAYKLNPGAI 187
            ||..|              .|::|||.|||:.:::.:||:...||..:..:|.   :.|.:||.:
  Rat   152 PFQSK--------------WLYVGTERGNIHIVNVESFTLSGYVIMWNKAIEL---SSKSHPGPV 199

  Fly   188 ESIRQLPNSPSKLLVAYNRGLCVLWDFESASVQRAYIAPGHGQSVGLTVNFEGSEFTWYHADGSY 252
            ..|...|....|||:.:..|..||||.:|......|.......||..  :.||.:|...|:||:.
  Rat   200 VHISDNPMDEGKLLIGFESGTVVLWDLKSKKADYRYTYDEAIHSVAW--HHEGKQFICSHSDGTL 262

  Fly   253 ATWSIDNPEPPSNVNYVPYG--------PDPCKSINRL-YKGKRRSNDVIVFSGGMPRSAYGDHN 308
            ..|::.:|..|.. ...|:|        |:|||.|.:: :|..|.....|:.|||:.....|...
  Rat   263 TIWNVRSPTKPVQ-TITPHGKQLKDGKKPEPCKPILKVEFKTTRSGEPFIILSGGLSYDTVGRRP 326

  Fly   309 CVSV-HASDGHKVCLDFTSKVIDFFVTFE----NNRDVAEVLVVLLEEELCAYDLTDPNICAIKA 368
            |::| |......:.:|::  ::||....|    |:......:|||||::|...||........:.
  Rat   327 CLTVMHGKSTAVLEMDYS--IVDFLTLCETPYPNDFQEPYAVVVLLEKDLVLIDLAQNGYPIFEN 389

  Fly   369 PYLHSVHASAVT-CNYLAS---EVVQSVYESILRAGDEQDIDYSNISWPITGGTLPDNLEESVEE 429
            ||..|:|.|.|| |.|.|.   :::.::|....|   ::...||...|||.||        :...
  Rat   390 PYPLSIHESPVTCCEYFADCPVDLIPALYSVGAR---QKRQGYSKKEWPINGG--------NWGL 443

  Fly   430 DATKLYEILLTGHEDGSVKFWDCTGVLLKPIYNFKTSSIFGSESDFRDDAAADMSAEQVDEGEPP 494
            .|....||::|||.|||:||||.:.:.|:.:|..|||.:| .:|..:||.   .:.:.|||    
  Rat   444 GAQSYPEIIITGHADGSIKFWDASAITLQVLYKLKTSKVF-EKSRNKDDR---QNTDIVDE---- 500

  Fly   495 FRKSGLFDPYSDDPRLAVKKIAFCPKTGQLIVGGTAGQIVIADF---------IDLPEKVSLKYI 550
                   |||      |::.|::||::..|.:.|.:..::|..|         |.:.| |.|.| 
  Rat   501 -------DPY------AIQIISWCPESRMLCIAGVSAHVIIYRFSKQEVVTEVIPMLE-VRLLY- 550

  Fly   551 SMNLVSDRDG-----------------FVWKGHDQLNVRSNLLDG--EAIPTTE---------RG 587
            .:|.|...:|                 ...:.|...:..|:  ||  :.:|..:         .|
  Rat   551 EINDVETPEGEQPPPLSTPVGSSTSQPIPPQSHPSTSSSSS--DGLRDNVPCLKVKNSPLKQSPG 613

  Fly   588 VNISGVLQVL-----PPASITCMALEASWGLVSGGTAHGLVLFDFKNFVPVFHRCTLNPNDLTGA 647
            .....|:|::     ||..||.:||.:|:|||..|.::|:.:.|:.....:.:..|:   :|.|:
  Rat   614 YQTELVIQLVWVGGEPPQQITSLALNSSYGLVVFGNSNGIAMVDYLQKAVLLNLSTI---ELYGS 675

  Fly   648 G-----EQLSRRKSFK----------------------------------------------KSL 661
            .     |..|.|||.:                                              |:.
  Rat   676 NDPYRREPRSPRKSRQPSGAGLCDITEGTVVPEDRCKSPTSGSSSPHNSDDEQKVNNFIEKVKTQ 740

  Fly   662 RESFRKLRKGRSTRTNQSNQVPTTLEARP---VERQIEARCADDGLGSM-------VRCLLFAKT 716
            ...|.|:......:.::...:||.|  :|   |:....:|.....:.|:       :..|.|.:|
  Rat   741 SRKFSKMVASDLAKMSRKLSLPTDL--KPDLDVKDNSFSRSRSSSVTSIDKESREAISALHFCET 803

  Fly   717 YVTNVNIT-SPTLWSATNASTVSVFLLHLP--PAQ-TAATAVPSASGN----------------- 760
            :....:.: ||.||..|...|..|..|:||  |.| .....:.|.||.                 
  Rat   804 FTRKADSSPSPCLWVGTTVGTAFVITLNLPLGPEQRLLQPVIVSPSGTILRLKGAILRMAFLDAA 868

  Fly   761 ----APPHMP---RRISAQLAKEIQLKHRAPVVGISIFDQAGSPVDQLNAGENGSPPHRVLIASE 818
                .|.:.|   ..:..:..::.:||.|.||        :.||.......||    ...:|.||
  Rat   869 GCLMPPAYEPWTEHNVPEEKDEKEKLKKRRPV--------SVSPSSSQEISEN----QYAVICSE 921

  Fly   819 EQFKVFSLPQLKPINKYKLTANEGARIRRIHFGSFSCRISPETLQSMHGCSPTKSTRSHGDGEAD 883
            :|.||.|||          |.|                           |:..:           
  Rat   922 KQAKVISLP----------TQN---------------------------CAYKQ----------- 938

  Fly   884 PNISGSLAVSRGDVY---NETALICLTNMGDIMVLSVPELKRQLNAAAVRREDINGVSSLCFTNS 945
             ||:.:..|.|||:.   |...|.|....|.||..|:|.|:..|:...:...::....:.||.||
  Rat   939 -NITETSFVLRGDIVALSNSVCLACFCANGHIMTFSLPSLRPLLDVYYLPLTNMRIARTFCFANS 1002

  Fly   946 GEALYMMSSSELQRIALATSRVVQPTGVVPVEPLENEESVLEE 988
            |:|||::|.:|:||:..:.            |..||.:.:|.|
  Rat  1003 GQALYLVSPTEIQRLTYSQ------------ETCENLQEMLGE 1033

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)glNP_523439.2 WD40 repeat 39..78 CDD:293791 25/38 (66%)
WD40 repeat 84..126 CDD:293791 14/53 (26%)
WD40 repeat 131..174 CDD:293791 11/42 (26%)
WD40 repeat 188..224 CDD:293791 11/35 (31%)
LLGL 268..>338 CDD:462446 21/83 (25%)
Stxbp5NP_848035.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 14..35 2/6 (33%)
WD40 <49..281 CDD:441893 87/257 (34%)
WD 1 62..95 23/32 (72%)
WD40 repeat 62..95 CDD:293791 23/32 (72%)
WD 2 102..141 10/41 (24%)
WD40 repeat 103..141 CDD:293791 10/40 (25%)
WD40 repeat 146..192 CDD:293791 16/62 (26%)
WD 3 146..182 13/49 (27%)
WD40 repeat 200..236 CDD:293791 11/35 (31%)
WD 4 201..235 11/33 (33%)
WD40 repeat 241..278 CDD:293791 11/39 (28%)
WD 5 241..273 10/33 (30%)
LLGL 276..385 CDD:462446 30/110 (27%)
WD 6 295..337 11/41 (27%)
WD 7 345..379 10/33 (30%)
WD 8 401..478 28/87 (32%)
WD 9 506..620 21/117 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 557..596 5/40 (13%)
WD 10 634..696 18/64 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 675..731 5/55 (9%)
WD 11 795..852 18/56 (32%)
WD 12 861..935 22/122 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 879..907 7/35 (20%)
WD 13 940..984 15/43 (35%)
WD 14 998..1021 12/22 (55%)
R-SNARE_STXBP5 1085..1145 CDD:277246
Blue background indicates that the domain is not in the aligned region.

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