Protein Alignment Rpt6 and RPT4

DIOPT Version :10

• Sequence 1: NP_608447.1
• Gene: Rpt6 / 33105
• FlyBaseID: FBgn0020369
• Length: 405
• Species: Drosophila melanogaster
• Sequence 2: NP_014902.3
• Gene: RPT4 / 854433
• SGDID: S000005785
• Length: 437
• Species: Saccharomyces cerevisiae
• Alignment Length: 369
• Identity: 163/369 - (44%)
• Similarity: 239/369 - (64%)
• Gaps: 8/369 - (2%)

  Fly    36 EKHQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDK 100
            ::.||:|.|:    :|..|.   ..:::.||..|..:|||:|.:.::|.:||.....:::|.:..
Yeast    76 QRRQNIRDLE----KLYDKT---ENDIKALQSIGQLIGEVMKELSEEKYIVKASSGPRYIVGVRN 133

  Fly   101 NIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIE 165
            ::|.:.:....||.|...:.|:.:|||.:.||||..|...:..:.|::.:|||.:||:|::||||
Yeast   134 SVDRSKLKKGVRVTLDITTLTIMRILPRETDPLVYNMTSFEQGEITFDGIGGLTEQIRELREVIE 198

  Fly   166 LPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMV 230
            ||:|:||:|..:||..||||||||||||||||||:|||......||....|.:|.|:|||.:|::
Yeast   199 LPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASGIVDKYIGESARII 263

  Fly   231 RELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATN 295
            ||:|..|:||.|.||||||:|:||..|...|:..|.|:|||::|||.|:|||:.....|:|||||
Yeast   264 REMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATN 328

  Fly   296 RIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKG 360
            |.|.||||||||||:|||:|.|.|||..||:|.|||:.|:..|...:.....::..|.:||:::.
Yeast   329 RPDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRN 393

  Fly   361 VCTEAGMYALRERRVHVTQEDFEMAVAKVMQ-KDSEKNMSIKKL 403
            ..||||.:|:|:.|.|:..:|...||.||.: |..|..:..:||
Yeast   394 CATEAGFFAIRDDRDHINPDDLMKAVRKVAEVKKLEGTIEYQKL 437

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt6	NP_608447.1	PRK03992	23..399	CDD:179699	161/363 (44%)
RPT4	NP_014902.3	PRK03992	66..433	CDD:179699	161/363 (44%)