Protein Alignment Rpt6 and RPT1A

DIOPT Version :10

• Sequence 1: NP_608447.1
• Gene: Rpt6 / 33105
• FlyBaseID: FBgn0020369
• Length: 405
• Species: Drosophila melanogaster
• Sequence 2: NP_175778.1
• Gene: RPT1A / 841812
• AraportID: AT1G53750
• Length: 426
• Species: Arabidopsis thaliana
• Alignment Length: 385
• Identity: 192/385 - (49%)
• Similarity: 258/385 - (67%)
• Gaps: 12/385 - (3%)

  Fly    16 GEGFRSYYIQKIEELQLVVAEKHQNLRRLQAQRN--------ELNAKVRMLREELQLLQEQGSYV 72
            |.|..|..|:|:|:....:|:|..:|..::....        :|.:..:|::||..|   |.:..
plant    30 GLGPYSAPIKKVEKEIKDLAKKINDLCGIKESDTGLAPPSQWDLVSDKQMMQEEQPL---QVARC 91

  Fly    73 GEVVKP-MDKKKVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSL 136
            .:::.| .:..|.::.|....||||.|...:...|:....||.:....|.:...||.|:||.|::
plant    92 TKIISPNTEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTM 156

  Fly   137 MMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 201
            |.||:.||.||..|||..:||::::||:|||:.|||.|..|||..|||||.||||||||||||||
plant   157 MTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARA 221

  Fly   202 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDS 266
            ||:.|:..||||.|||||||::|||:|||||||.|||.....|:|.||:|:||.:|.:.|.|||:
plant   222 VANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDN 286

  Fly   267 EVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIH 331
            ||||||||::||||||:|..||||:|||||.|.||||||||||:|||:||..|:.|:|..|.|||
plant   287 EVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIH 351

  Fly   332 SRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQ 391
            :|.||..|.|....:|.|.|.::||:::.|||||||||:|.||..||::||..||.||::
plant   352 TRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIK 411

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt6	NP_608447.1	PRK03992	23..399	CDD:179699	189/378 (50%)
RPT1A	NP_175778.1	PRK03992	113..423	CDD:179699	174/299 (58%)