DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt6 and AT1G05910

DIOPT Version :10

Sequence 1:NP_608447.1 Gene:Rpt6 / 33105 FlyBaseID:FBgn0020369 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_563753.1 Gene:AT1G05910 / 837101 AraportID:AT1G05910 Length:1210 Species:Arabidopsis thaliana


Alignment Length:254 Identity:98/254 - (38%)
Similarity:147/254 - (57%) Gaps:19/254 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 DSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTEC 208
            |..::.:|||.:.|.::||::..|:.:||.|.:..|..|:||||.|||||||||:|||:|    |
plant   377 DINFDDIGGLSEYINDLKEMVFFPLLYPEFFASYSITPPRGVLLCGPPGTGKTLIARALA----C 437

  Fly   209 ---------TFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGG 264
                     :|....|::::.|::||..|.::.||..|:.:.|||||.||||.:...|.......
plant   438 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQI 502

  Fly   265 DSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILK 329
            .:.:..|:|.|   :||.::...:.:|.||||:|.:|.||.||||.||:..|..|..|||.:||.
plant   503 HNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFSLPGCEARAEILD 564

  Fly   330 IHSRKMN--LTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAV 386
            ||:||..  .||.:. .::|....|..||::|.:||||.:.|.||:...|...|.:.|:
plant   565 IHTRKWKHPPTRELK-EELAATCVGYCGADLKALCTEAAIRAFREKYPQVYTSDDKYAI 622

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt6NP_608447.1 PRK03992 23..399 CDD:179699 98/254 (39%)
AT1G05910NP_563753.1 SpoVK 258..617 CDD:440232 96/247 (39%)
P-loop containing Nucleoside Triphosphate Hydrolases 382..551 CDD:476819 69/175 (39%)
Bromo_AAA 895..1005 CDD:99957
Blue background indicates that the domain is not in the aligned region.

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