Protein Alignment Rpt6 and RPT3

DIOPT Version :10

• Sequence 1: NP_608447.1
• Gene: Rpt6 / 33105
• FlyBaseID: FBgn0020369
• Length: 405
• Species: Drosophila melanogaster
• Sequence 2: NP_200637.1
• Gene: RPT3 / 835941
• AraportID: AT5G58290
• Length: 408
• Species: Arabidopsis thaliana
• Alignment Length: 365
• Identity: 160/365 - (43%)
• Similarity: 238/365 - (65%)
• Gaps: 15/365 - (4%)

  Fly    34 VAEKHQNLRR--LQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVV 96
            |.::.:||:|  |:||            ||::.:|.....:|:.::.:|:...:|.......:.|
plant    51 VKDEQKNLKRELLRAQ------------EEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYV 103

  Fly    97 DLDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIK 161
            .:...|:...:.|:..|||...|..|..:||.:.|..:||:...:.||.:|..:||.|.|.:||:
plant   104 RILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVSYNDIGGCDIQKQEIR 168

  Fly   162 EVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEG 226
            |.:|||:.|.||:..:||..|:|||||||||||||:||:|||:||...||||.|||.|||::|||
plant   169 EAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEG 233

  Fly   227 SRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVI 291
            .||||::|.:|:|:||:|||:||:|:|.::|.::.:|.|.||||.::|||||:|||:.|.|:|||
plant   234 PRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVI 298

  Fly   292 MATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGA 356
            |||||.|.||||||||||:|||||||.|:...:..:.::.:.||||:..::|..........|.|
plant   299 MATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLEDYVSRPDKISAA 363

  Fly   357 EVKGVCTEAGMYALRERRVHVTQEDFEMAV-AKVMQKDSE 395
            |:..:|.||||:|:|:.|..:..:|||... |.|.:.|::
plant   364 EIAAICQEAGMHAVRKNRYVILPKDFEKGYRANVKKPDTD 403

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt6	NP_608447.1	PRK03992	23..399	CDD:179699	160/365 (44%)
RPT3	NP_200637.1	PTZ00454	15..408	CDD:240423	160/365 (44%)