Protein Alignment Rpt6 and CCP1

DIOPT Version :10

• Sequence 1: NP_608447.1
• Gene: Rpt6 / 33105
• FlyBaseID: FBgn0020369
• Length: 405
• Species: Drosophila melanogaster
• Sequence 2: NP_973600.1
• Gene: CCP1 / 818020
• AraportID: AT2G34560
• Length: 393
• Species: Arabidopsis thaliana
• Alignment Length: 352
• Identity: 116/352 - (32%)
• Similarity: 178/352 - (50%)
• Gaps: 40/352 - (11%)

  Fly    77 KPMDKKKVLVKVHPEGKFVVDLDKNIDINDVTPNC--------RVALRNESYTLHKILPNKVDPL 133
            |.:.::.|..|..||     |...|.:..||..|.        ..||.|.:....|...:...|.
plant    27 KKLPEEDVSNKDQPE-----DGSSNGNNGDVNNNSSPVTNQDGNTALANGNVIREKPKKSMFPPF 86

  Fly   134 -----------VSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVL 186
                       :|..::...|:..:|.:.||:...|.:||.:.:|:|:|..|:  |:..| ||:|
plant    87 ESAETRTLAESLSRDIIRGNPNIKWESIKGLENAKKLLKEAVVMPIKYPTYFN--GLLTPWKGIL 149

  Fly   187 LYGPPGTGKTLLARAVAHHTEC--TFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDE 249
            |:||||||||:||:|||  |||  ||..:|.|.:|.|:.|:..:::|.||.:||.||||.||:||
plant   150 LFGPPGTGKTMLAKAVA--TECNTTFFNISASSVVSKWRGDSEKLIRVLFDLARHHAPSTIFLDE 212

  Fly   250 IDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKN-IKVIMATNRIDILDPALLRPGRIDRK 313
            ||:|.|.|...|.......:|...|||.|:||.:.|.. :.|:.|||....||.|:||  |::::
plant   213 IDAIISQRGGEGRSEHEASRRLKTELLIQMDGLQKTNELVFVLAATNLPWELDAAMLR--RLEKR 275

  Fly   314 IEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALR------E 372
            |..|.|:.|||..:.::..........:....:.|...|.||::::.:|.||.|..||      |
plant   276 ILVPLPDPEARRGMFEMLIPSQPGDEPLPHDVLVEKSEGYSGSDIRILCKEAAMQPLRRTLAILE 340

  Fly   373 RRVHVTQEDFEMAVAKVMQKDSEKNMS 399
            .|..|..||....:..::.:|.::.:|
plant   341 DREDVVPEDELPKIGPILPEDIDRALS 367

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt6	NP_608447.1	PRK03992	23..399	CDD:179699	115/350 (33%)
CCP1	NP_973600.1	RecA-like_VPS4-like	114..278	CDD:410917	76/169 (45%)
		AAA_lid_3	306..343	CDD:465537	11/36 (31%)