DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt6 and Gk

DIOPT Version :10

Sequence 1:NP_608447.1 Gene:Rpt6 / 33105 FlyBaseID:FBgn0020369 Length:405 Species:Drosophila melanogaster
Sequence 2:XP_008771496.1 Gene:Gk / 79223 RGDID:70893 Length:587 Species:Rattus norvegicus


Alignment Length:265 Identity:52/265 - (19%)
Similarity:90/265 - (33%) Gaps:84/265 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGK 195
            ||...|..|.:..:.|.|.:|.|:..|..||              |:|::..:...:.....||:
  Rat    56 DPKEILQSVYECIEKTCEKLGQLNIDISNIK--------------AIGVSNQRETTVVWDKLTGE 106

  Fly   196 TLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIES 260
            .|. .|||....      .||.:....:..||                     .:.:.|:|.:..
  Rat   107 PLY-NAVAAPVS------PGSSVPVAVVPSGS---------------------PVPAAGASSVWL 143

  Fly   261 GSGGDSEVQRTMLELLNQLDG----------------FEATK------NIKVI---MATNR--ID 298
                |...|.|:.:|..::.|                |.|.|      |:|.:   :..||  ..
  Rat   144 ----DLRTQSTVEKLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVKKVQEAVEENRALFG 204

  Fly   299 ILDPALL--RPGRIDRKIEFPPPNEEARLDILKIHS----RKMNLTRGINLRKIAELMPGA-SGA 356
            .:|..|:  ..|.|:..:........:|..:..|||    :::....||.:    |::|.. |.:
  Rat   205 TIDSWLIWSLTGGINGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFGIPM----EILPNVRSSS 265

  Fly   357 EVKGV 361
            |:.|:
  Rat   266 EIYGL 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt6NP_608447.1 PRK03992 23..399 CDD:179699 52/265 (20%)
GkXP_008771496.1 ASKHA_NBD_FGGY_GK1-3-like 11..544 CDD:466802 52/265 (20%)

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