DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rpt6 and PSMC4

DIOPT Version :10

Sequence 1:NP_608447.1 Gene:Rpt6 / 33105 FlyBaseID:FBgn0020369 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_006494.1 Gene:PSMC4 / 5704 HGNCID:9551 Length:418 Species:Homo sapiens


Alignment Length:416 Identity:168/416 - (40%)
Similarity:247/416 - (59%) Gaps:47/416 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 IEELQLVVAEKHQNLRRLQAQR---------------NELNAKVRMLREELQLLQEQGSYVGEVV 76
            :||:.::|.:....:..|...|               .:|.::.:.|::||:.|:.|..|:.:..
Human     1 MEEIGILVEKAQDEIPALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQ 65

  Fly    77 KPMDKKKVLVKVHPE-----------GKFVVDLDKN-------------------IDINDVTPNC 111
            |.:  ||..:....|           |:|:..:|:|                   ||...:.||.
Human    66 KNL--KKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNA 128

  Fly   112 RVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDA 176
            .|||...|..|..:||.:.|..:.::..::.||..|..:||:|.|.:|::|.:|||:.|.||:..
Human   129 SVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQ 193

  Fly   177 LGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHA 241
            :||..|:|||:|||||.|||:||:||||||...||||.|||.|||::|||.||||::|.:|:|:|
Human   194 IGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENA 258

  Fly   242 PSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLR 306
            |:|||:||||:|.:.|.::.:|.|.||||.:||||||:|||:...|:||||||||.|.|||||||
Human   259 PAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLR 323

  Fly   307 PGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALR 371
            |||:|||||||.|:...:..|....:.||||:..::|..........|||::..:|.|:||.|:|
Human   324 PGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVR 388

  Fly   372 ERRVHVTQEDFEMAVAKVMQKDSEKN 397
            |.|..|..:|||.|...|::||.:::
Human   389 ENRYIVLAKDFEKAYKTVIKKDEQEH 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt6NP_608447.1 PRK03992 23..399 CDD:179699 168/416 (40%)
PSMC4NP_006494.1 PTZ00454 34..418 CDD:240423 163/383 (43%)

Return to query results.
Submit another query.