DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt6 and PSMC1

DIOPT Version :10

Sequence 1:NP_608447.1 Gene:Rpt6 / 33105 FlyBaseID:FBgn0020369 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_002793.2 Gene:PSMC1 / 5700 HGNCID:9547 Length:440 Species:Homo sapiens


Alignment Length:372 Identity:179/372 - (48%)
Similarity:253/372 - (68%) Gaps:4/372 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 IQKIEELQLVVAEKHQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKV 88
            :::|::..|:..|..:|    |.|...|..|....|.::..|:.....||.:.:.:|....:|..
Human    65 LERIKDYLLMEEEFIRN----QEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVST 125

  Fly    89 HPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGL 153
            ....:..|.:...:|.:.:.|.|.|.|.::.:.:..:|.:..||||::|.|||.|..||..:|||
Human   126 SVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGL 190

  Fly   154 DKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSEL 218
            |.||:||||.:|||:.|||.::.:||..||||:|||||||||||||:|||:.|..||:||.||||
Human   191 DNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL 255

  Fly   219 VQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 283
            :||::|:|.::|||||.:|.||||||:|:||||:||:.|.:|.|||:.|:||||||||||||||:
Human   256 IQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFD 320

  Fly   284 ATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAE 348
            :..::|||||||||:.|||||:||||||||||||.|:|:.:..|.:||:.:|.|...:.|..:..
Human   321 SRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIM 385

  Fly   349 LMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSE 395
            .....|||::|.:|||||:.||||||:.||.|||:.:...|:.|..|
Human   386 AKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQE 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt6NP_608447.1 PRK03992 23..399 CDD:179699 179/372 (48%)
PSMC1NP_002793.2 PTZ00361 1..440 CDD:185575 179/372 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..49
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 84..104 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.

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