Protein Alignment Rpt6 and Rpt5

DIOPT Version :10

• Sequence 1: NP_608447.1
• Gene: Rpt6 / 33105
• FlyBaseID: FBgn0020369
• Length: 405
• Species: Drosophila melanogaster
• Sequence 2: NP_524464.1
• Gene: Rpt5 / 42805
• FlyBaseID: FBgn0028684
• Length: 428
• Species: Drosophila melanogaster
• Alignment Length: 384
• Identity: 172/384 - (44%)
• Similarity: 243/384 - (63%)
• Gaps: 24/384 - (6%)

  Fly    29 ELQLVVAEKHQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMD------------- 80
            |::::.:|..:....:|||    |.|::...|::::.:.....|..|::.:|
  Fly    40 EIKIMKSEVIRITHEIQAQ----NEKIKDNTEKIKVNKTLPYLVSNVIELLDVDPQEEEDDGSVT 100

  Fly    81 -------KKKVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMM 138
                   .|..::|......:.:.:...:|...:.|...|.:..:||.:.:.||.:.|..|..|.
  Fly   101 VLDNQRKGKCAVIKTSTRQAYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAME 165

  Fly   139 VEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 203
            |::.|...|..:|||||||:|:.|.:.||:.|.|.|..|||..||||||||||||||||||||.|
  Fly   166 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFKNLGIHPPKGVLLYGPPGTGKTLLARACA 230

  Fly   204 HHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEV 268
            ..|:.||::::|.:|||.|||:|:::||:.|.:|:|.||:|||:||:|:||:.|.:|...||.||
  Fly   231 AQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREV 295

  Fly   269 QRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSR 333
            ||||||||||||||.:|.:||||.||||:|||||||||.||:|||||||.||||||..|::||||
  Fly   296 QRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSR 360

  Fly   334 KMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK 392
            |||::..:|..:::......:||:.|.||.||||.|||.....||.|||..|:.:|..|
  Fly   361 KMNVSNDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSANSVTHEDFMDAIMEVQAK 419

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt6	NP_608447.1	PRK03992	23..399	CDD:179699	172/384 (45%)
Rpt5	NP_524464.1	PRK03992	28..421	CDD:179699	172/384 (45%)