DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt6 and CG8298

DIOPT Version :10

Sequence 1:NP_608447.1 Gene:Rpt6 / 33105 FlyBaseID:FBgn0020369 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_610718.1 Gene:CG8298 / 36282 FlyBaseID:FBgn0033673 Length:596 Species:Drosophila melanogaster


Alignment Length:113 Identity:27/113 - (23%)
Similarity:41/113 - (36%) Gaps:36/113 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 KEIKEVIELPVK-------HPELFDALGIAQPKGVLLYGPPGTG------------------KTL 197
            |..:|.||...|       :|....|:||...:|..:.....||                  |||
  Fly    62 KNTQECIETAYKNLVILEINPRDIIAIGIVNQRGTSVLWNLETGQPLHNAIGWSDCRSTPILKTL 126

  Fly   198 LARAVAHHTECTFIRV-SGSELVQKFIGEGSRMVRELFVMAREHAPSI 244
            | ..|.|:.:  ::|. ||..|...|   .:..:|.|.    :|.|::
  Fly   127 L-HNVRHNVD--YVRYRSGLPLSSCF---SALKIRWLM----DHVPAV 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt6NP_608447.1 PRK03992 23..399 CDD:179699 27/113 (24%)
CG8298NP_610718.1 ASKHA_ATPase-like 19..540 CDD:483947 27/113 (24%)

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