Protein Alignment Rpt6 and rpt-3

DIOPT Version :10

• Sequence 1: NP_608447.1
• Gene: Rpt6 / 33105
• FlyBaseID: FBgn0020369
• Length: 405
• Species: Drosophila melanogaster
• Sequence 2: NP_498429.1
• Gene: rpt-3 / 175925
• WormBaseID: WBGene00004503
• Length: 414
• Species: Caenorhabditis elegans
• Alignment Length: 372
• Identity: 159/372 - (42%)
• Similarity: 235/372 - (63%)
• Gaps: 9/372 - (2%)

  Fly    30 LQLVVAEKHQNLRRLQAQRNELNAKVRMLREELQLLQEQGS-------YVGEVVKPMDKKKVLVK 87
            ::|...|:  .|..||...:.:..:.|.|.:||...||:..       .:|:.::.:|:...:|.
 Worm    38 IKLTTLER--QLAHLQVMEDYIKLETRNLEKELLHAQEEVKRIQSVPLVIGQFLEAVDQNHAIVG 100

  Fly    88 VHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGG 152
            ......:.|.:...:|...:.|.|.|||...|..|..:||.:.|..:.::..::.||.:|..:||
 Worm   101 STTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDEKPDISYGDIGG 165

  Fly   153 LDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 217
            ||.|.:|::|.:|||:.|.||:..:||..|:|||:|||||.|||:||:|||.:|..:||||.|||
 Worm   166 LDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAANTAASFIRVVGSE 230

  Fly   218 LVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF 282
            .|||::|||.||||::|.:|:|::|||||:||||:|.:.|.::.:|.|.||||.:||||||:|||
 Worm   231 FVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGF 295

  Fly   283 EATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIA 347
            :.:.|:||||||||.|.||||||||||:|||||||.|:...:..:......:|||:..::|....
 Worm   296 DQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDLEDWV 360

  Fly   348 ELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDS 394
            ......|||::..:|.||||.|:||.|..|..:|.|.|...|::||:
 Worm   361 ARPDKISGADINSICQEAGMQAVRENRYVVLTKDLEKAYKNVVKKDT 407

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt6	NP_608447.1	PRK03992	23..399	CDD:179699	159/372 (43%)
rpt-3	NP_498429.1	PTZ00454	35..414	CDD:240423	159/372 (43%)