Protein Alignment Rpt6 and rpt-4

DIOPT Version :10

• Sequence 1: NP_608447.1
• Gene: Rpt6 / 33105
• FlyBaseID: FBgn0020369
• Length: 405
• Species: Drosophila melanogaster
• Sequence 2: NP_001022113.1
• Gene: rpt-4 / 173384
• WormBaseID: WBGene00004504
• Length: 406
• Species: Caenorhabditis elegans
• Alignment Length: 367
• Identity: 175/367 - (47%)
• Similarity: 247/367 - (67%)
• Gaps: 4/367 - (1%)

  Fly    23 YIQKIEELQLVVAEKHQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVK 87
            |.:|:.|.:    :..|.|:.|:.:.:|:..:......:::.||..|..||||:|.:.::|.:||
 Worm    29 YRRKLAECR----DIEQKLKDLRKKESEMTKQFDKSENDIKSLQSVGQIVGEVLKQLSEEKFIVK 89

  Fly    88 VHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGG 152
            .....::||...::|:..::....||:|...:.|:.:.||.:|||||..|..|...:.:|..|||
 Worm    90 ATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNISYSDVGG 154

  Fly   153 LDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 217
            |.:||:|::||:|||:.:||||..:||..|||.||:|||||||||||||||...:|.|::|..|.
 Worm   155 LAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSA 219

  Fly   218 LVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF 282
            :|.|:|||.:||:||:|..||:|.|.|:||||||:||..|...|:..|.|:|||::|||||||||
 Worm   220 IVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGF 284

  Fly   283 EATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIA 347
            ::...:||||||||.|.||||||||||:|||||...|||::||:||||||.|:.....|:...:.
 Worm   285 DSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEIDFEAVV 349

  Fly   348 ELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKV 389
            :|..|.|.|:::.|||||||:|:|..|..|..|||..||.||
 Worm   350 KLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDFMKAVRKV 391

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt6	NP_608447.1	PRK03992	23..399	CDD:179699	175/367 (48%)
rpt-4	NP_001022113.1	PRK03992	21..391	CDD:179699	173/365 (47%)