DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt6 and LOC1271199

DIOPT Version :10

Sequence 1:NP_608447.1 Gene:Rpt6 / 33105 FlyBaseID:FBgn0020369 Length:405 Species:Drosophila melanogaster
Sequence 2:XP_309949.4 Gene:LOC1271199 / 1271199 VectorBaseID:AGAMI1_014752 Length:431 Species:Anopheles gambiae


Alignment Length:424 Identity:175/424 - (41%)
Similarity:244/424 - (57%) Gaps:45/424 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 EIESAYHKGEGFRSYYIQKIEELQLVVAEKHQNLRRLQAQRNE-----------------LNAKV 55
            :|||  |    .|...|:|..|...:.....:.:||.....||                 |..||
Mosquito     5 QIES--H----LREDSIEKTVEETFLGWSTEELIRRTNGLNNEIKVLKDLLVSPVMDLKTLTGKV 63

  Fly    56 RMLREELQLLQEQGSYVGEVVKPMDK----------------------KKVLVKVHPEGKFVVDL 98
            ....|.::|.:.....|..|::.:|.                      |..::|......|.:.:
Mosquito    64 NTNAEHIKLHKRLPHLVATVMEVLDMDPLEEEKEQEDAMLLQDSQRKCKSAIIKTSTRQTFFLPI 128

  Fly    99 DKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEV 163
            ...::...:.|...|.|..::|.:...||.::||.|..|.|.:.|...|..:||||.||.|:.|.
Mosquito   129 IGLVEPEALKPGDLVGLNKDAYLIMDKLPPELDPRVKAMEVIERPTEQYIDIGGLDTQIAELMEA 193

  Fly   164 IELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSR 228
            |.||:.|...|:.:||..|||||:||||||||||||||.|..|:.|||:::|.:|||.|||:|::
Mosquito   194 IVLPLTHKAKFERIGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFIKLAGPQLVQMFIGDGAK 258

  Fly   229 MVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMA 293
            :||:.|.:|:|.||:|:|:||:|:||:.|.:|...||.||||||||||||||||.::.::|||.|
Mosquito   259 LVRDAFALAKEKAPTILFIDELDAIGTKRFDSTKAGDREVQRTMLELLNQLDGFSSSADVKVIGA 323

  Fly   294 TNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEV 358
            |||:||||||:||.||:|||||||.||:.||..|::||||:||::..:|..::|....|.:||:.
Mosquito   324 TNRVDILDPAMLRSGRLDRKIEFPHPNDVARARIMQIHSRRMNVSGEVNYEELARSTDGFNGAQC 388

  Fly   359 KGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK 392
            |.||.||||.|||...|.|..|||..|:.:|..|
Mosquito   389 KAVCVEAGMIALRRSAVEVAHEDFMEAILEVQAK 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt6NP_608447.1 PRK03992 23..399 CDD:179699 170/409 (42%)
LOC1271199XP_309949.4 None

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