DRSC/TRiP Functional Genomics Resources

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Protein Alignment shakB and zpg

DIOPT Version :10

Sequence 1:NP_608410.2 Gene:shakB / 33062 FlyBaseID:FBgn0085387 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_648049.1 Gene:zpg / 251414 FlyBaseID:FBgn0024177 Length:367 Species:Drosophila melanogaster


Alignment Length:356 Identity:111/356 - (31%)
Similarity:182/356 - (51%) Gaps:42/356 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 VKIDSPVFRLHTNATVILLITFSIAVTTRQYVGNPIDCVHTRDIPEDVLNTYCWIHSTY-----T 235
            |.|...:|.||:..||.||:..:..::::||.|:||.|...:|:  |.::.:|||:..|     |
  Fly    17 VHIYDAIFTLHSKVTVALLLACTFLLSSKQYFGDPIQCFGDKDM--DYVHAFCWIYGAYVSDNVT 79

  Fly   236 VV-----------DAFMKKQGSEVPFPGVHNSQGRGPLTIKHTKYYQWVAFTLFFQAILFYTPRW 289
            |.           ||..|    .||           |....:..|||||...|..::.:||.|.:
  Fly    80 VTPLRNGAAQCRPDAVSK----VVP-----------PENRNYITYYQWVVLVLLLESFVFYMPAF 129

  Fly   290 LWKSWEGGKIHALIMDL-DIGICSEAEKKQKKKLLLDYLWENLRYHNWWAYRYYV----CELLAL 349
            |||.||||::..|..|. .:.:|.: :.:...::|::|...:.:..:   :||:|    ||:|.|
  Fly   130 LWKIWEGGRLKHLCDDFHKMAVCKD-KSRTHLRVLVNYFSSDYKETH---FRYFVSYVFCEILNL 190

  Fly   350 INVIGQMFLMNRFFDGEFITFGLKVIDYMETDQEDRMDPMIYIFPRMTKCTFFKYGSSGEVEKHD 414
            ...|....|::.||.|.:..:...::.....|........:.:||:..||..:|.|.||....:|
  Fly   191 SISILNFLLLDVFFGGFWGRYRNALLSLYNGDYNQWNIITMAVFPKCAKCEMYKGGPSGSSNIYD 255

  Fly   415 AICILPLNVVNEKIYIFLWFWFILLTFLTLLTLIYRVVIIFSPRMRVYLFRMRFRLVRRDAIEII 479
            .:|:||||::||||:.|||.||||:..|..|..:||:..:..|.||:.|.|.|.|.:.:..:::.
  Fly   256 YLCLLPLNILNEKIFAFLWIWFILVAMLISLKFLYRLATVLYPGMRLQLLRARARFMPKKHLQVA 320

  Fly   480 VRRSKMGDWFLLYLLGENIDTVIFRDVVQDL 510
            :|....||||:|..:|.||...:||.::::|
  Fly   321 LRNCSFGDWFVLMRVGNNISPELFRKLLEEL 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shakBNP_608410.2 Innexin 180..513 CDD:459975 109/352 (31%)
zpgNP_648049.1 Innexin 21..353 CDD:459975 109/352 (31%)

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