DRSC/TRiP Functional Genomics Resources

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Protein Alignment shakB and inx-10

DIOPT Version :10

Sequence 1:NP_608410.2 Gene:shakB / 33062 FlyBaseID:FBgn0085387 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_001024139.1 Gene:inx-10 / 188580 WormBaseID:WBGene00002132 Length:559 Species:Caenorhabditis elegans


Alignment Length:408 Identity:106/408 - (25%)
Similarity:166/408 - (40%) Gaps:104/408 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 VFRLHTNATVILLITFSIAVTTRQYVGNPIDCVHTRDIP-------EDVLNTYCWIHSTYTVVDA 239
            |.|||:..|..|||..::.|:.:|:.|.|::|:    :|       |.....|||...||.|   
 Worm    22 VDRLHSYFTCNLLIGLAVLVSFKQFGGKPVECL----VPDIFSSSWEQYAENYCWASDTYYV--- 79

  Fly   240 FMKKQGSEVPFPGVHNSQGRGPLTIKHTKYYQWVAFTLFFQAILFYTPRWLWK---SWEGGKIHA 301
                 .:..|..|:.:.:.|.    :...|||||.|.|..:|..|..|..|||   ...|.||:.
 Worm    80 -----PTNEPVAGLQSDEKRQ----RKISYYQWVPFFLLLEAACFRLPSLLWKYLAGHSGIKINE 135

  Fly   302 LI--------MDLDI-------------GICSEAEKKQKKKLLLD-YLW-ENLRYHNWWAYRYYV 343
            ::        :..||             |......:.|||::... :|| .||.|..::....|:
 Worm   136 IVKLSSDPNNIKPDIKRANIKSLTVHLQGALRFHRRLQKKQIRPHRFLWLFNLPYSAFFVTAMYL 200

  Fly   344 C-ELLALINVIGQMFLMNRFFD-GEFITFGL-KVIDYME--TDQEDRMDPMIYIFPRMTKCTFFK 403
            | :...|.||..|:..||||.: .::..:|: .::|.:.  |.::..|      |||::.|. |.
 Worm   201 CTKFFYLANVCLQLMFMNRFLETDKYKWYGMGALVDLLNGTTWEQSGM------FPRVSLCD-FD 258

  Fly   404 YGSSGEVEKHDAICILPLNVVNEKIYIFLWFWFILLTFLTLLTLIYRVVIIFSPRMRVYLFRMRF 468
            ....|.:::|...|:|.:|:.||||:|.||||::.|...|..:..|.:::               
 Worm   259 VRVMGNMQEHTIQCVLVINIFNEKIFILLWFWYLALLVFTFGSFFYWLLV--------------- 308

  Fly   469 RLVRRDAIEIIVRRSKMGD----------------WFLLYLLGENI---------DTVIFRDVVQ 508
            .|.|...:..|:|..:|.|                :...||..:.:         ..|||.   .
 Worm   309 SLWRHLNVRFIIRHLEMSDIAFDSSEDGAQEKVNRFISNYLKSDGVFVIRMMTLQSGVIFG---T 370

  Fly   509 DLANRLGHNQHHRVPGLK 526
            ||...|..|.|...|.||
 Worm   371 DLVQELWRNFHGSEPQLK 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shakBNP_608410.2 Innexin 180..513 CDD:459975 100/393 (25%)
inx-10NP_001024139.1 Innexin 20..379 CDD:459975 101/397 (25%)

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