DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment shakB and inx-8

DIOPT Version :10

Sequence 1:NP_608410.2 Gene:shakB / 33062 FlyBaseID:FBgn0085387 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_502209.1 Gene:inx-8 / 178101 WormBaseID:WBGene00002130 Length:382 Species:Caenorhabditis elegans


Alignment Length:338 Identity:86/338 - (25%)
Similarity:135/338 - (39%) Gaps:61/338 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 SSVSHV---KIDSPVFRLHTNATVILLITFSIAVTTRQYVGNPIDC----VHTRDIPEDVLNTYC 228
            |..||:   .||.....|....|..|.||.:|..:.:.|||:.::|    .::.|..|...| ||
 Worm     9 SLTSHLGITAIDDASDTLSCLITAFLFITAAILTSAKTYVGSAMECWLPQTYSGDWGEFAEN-YC 72

  Fly   229 WIHSTYTVVDAFMKKQGSEVPFPGVHNSQGRGPLTIKHTKYYQWVAFTLFFQAILFYTPRWLWKS 293
            ::..||     |..:|.|....|..|..:.|  ||     ||||.:..|....|.|..|::||:.
 Worm    73 FLKDTY-----FYPRQQSMTDIPMYHKERHR--LT-----YYQWSSMYLAVAGIAFMIPKFLWRL 125

  Fly   294 WEGGKIHALIMDLDIG--ICSEAEKKQKKKLL--------------LDYLWENLRYHNWWAYRYY 342
            .:......::...|..  |.:|.|.|:..|:.              ...|:..:|.:    ..|.
 Worm   126 SQSTTDMPVVYFCDTANEIKNETEDKRSAKIKEMARFMRTKITSVHTPSLFSFIRMY----MVYS 186

  Fly   343 VCELLALINVIGQMFLM--------NRFFDGEFITFGLKVIDYMETDQEDRMDPMIYIFPRMTKC 399
            |.::|.|:|.|.|..::        |.|:........|..|.:..|.          :|||:|.|
 Worm   187 VIKILYLVNAIAQFVIIAIFLGQKRNLFWGWTLFMNLLNGITWETTG----------LFPRVTFC 241

  Fly   400 TFFKYGSSGEVEKHDAICILPLNVVNEKIYIFLWFWFILLTFLTLLTLIYRVVIIFSPRMRVYLF 464
            .|.....:|........|::.:|..||||::|.|||.:.|.|.||:...|....|..|   .::.
 Worm   242 DFQVREMAGNNRDETVECVIGINEFNEKIFLFFWFWLVFLVFSTLIAHFYNAAQIVKP---YFIH 303

  Fly   465 RMRFRLVRRDAIE 477
            .:.|.:...|.::
 Worm   304 SLLFAIRDHDIVD 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shakBNP_608410.2 Innexin 180..513 CDD:459975 81/326 (25%)
inx-8NP_502209.1 Innexin 21..356 CDD:459975 81/326 (25%)

Return to query results.
Submit another query.