DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and RABG3B

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_173688.1 Gene:RABG3B / 838880 AraportID:AT1G22740 Length:203 Species:Arabidopsis thaliana


Alignment Length:205 Identity:78/205 - (38%)
Similarity:119/205 - (58%) Gaps:21/205 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQERFRT 72
            |.|::|:|||||||:||:.::.::.||..|..|||.||..:.:.|:...|.||||||||||||::
plant     8 LLKVIILGDSGVGKTSLMNQYVNNKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQS 72

  Fly    73 ITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNCD-----VVKKVLVGNKND-DPDRKVVI 131
            :...:|||....::||||.:.:||.::..|..|......     ....:|:|||.| |.....|:
plant    73 LGVAFYRGADCCVLVYDVNHLKSFESLDNWHNEFLTRASPRDPMAFPFILLGNKVDIDGGNSRVV 137

  Fly   132 TEDAQR--FAKQMDIELFETSAKDNINVENMFLSITRQVLDHKLRTSPNEQQKDTLHLKPNPKGS 194
            :|...|  .|::.:|..||||||::.||::.||.||:..|       .||:.:| ::.:|: .||
plant   138 SEKKAREWCAEKGNIVYFETSAKEDYNVDDSFLCITKLAL-------ANERDQD-IYFQPD-TGS 193

  Fly   195 ----KGGKCC 200
                :||..|
plant   194 VPEQRGGCAC 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 78/205 (38%)
RABG3BNP_173688.1 Rab7 9..180 CDD:206655 68/177 (38%)

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