DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and RABH1e

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_196588.3 Gene:RABH1e / 830890 AraportID:AT5G10260 Length:207 Species:Arabidopsis thaliana


Alignment Length:208 Identity:78/208 - (37%)
Similarity:118/208 - (56%) Gaps:26/208 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQERFRTI 73
            :||:.:||..|||:|::.||..|.|..:|..|||:||..:|:.:|...|:||:||||||||||::
plant    10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSL 74

  Fly    74 TSTYYRGTHGVIVVYDVTNGESFANVRRWLEEI--QNNCDVVKKVLVGNKNDDPDRKVVITEDAQ 136
            ..:|.|.:...::||||.|.:||.|..:|:|::  :...||: .||||||.|..|::.|..|:..
plant    75 IPSYIRDSSVAVIVYDVANRQSFLNTSKWIEDVRTERGSDVI-IVLVGNKTDLVDKRQVSIEEGD 138

  Fly   137 RFAKQMDIELFETSAKDNINVENMF------------LSITRQ--VLDHKLRTSPNEQQKDTLHL 187
            ..|:...:...|||||...|::.:|            ||.|:|  ::|..|:||.|..|.:.   
plant   139 NKARDYGVIFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLKTSSNSAQGEQ--- 200

  Fly   188 KPNPKGSKGGKCC 200
                  .:||..|
plant   201 ------QRGGCAC 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 78/208 (38%)
RABH1eNP_196588.3 Rab6 10..170 CDD:206654 65/160 (41%)

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