DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and Rab13

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_112354.1 Gene:Rab13 / 81756 RGDID:620880 Length:203 Species:Rattus norvegicus


Alignment Length:204 Identity:103/204 - (50%)
Similarity:147/204 - (72%) Gaps:9/204 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MARGFDHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTA 65
            ||:.:|||||||:||||||||:.|:|||::|.|:.:||:|||:|||||||:|||.|:|||:||||
  Rat     1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWDTA 65

  Fly    66 GQERFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNCDV-VKKVLVGNKNDDPDRKV 129
            |||||:|||:.||||..|:|:|||:|:.:||.|::.|::.|:.|... |:::|:|||.|...::.
  Rat    66 GQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRK 130

  Fly   130 VITEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLDHKLRT----SPNEQQKDTLHLKPN 190
            |..|.|:|.|::..|..||||||.::||:..|.|:.|.:|   |:|    |.|..:..:..||.:
  Rat   131 VQREQAERLAREHRIRFFETSAKSSVNVDEAFSSLARDIL---LKTGGRRSGNSSKPSSTDLKVS 192

  Fly   191 PKGSKGGKC 199
            .| ....||
  Rat   193 DK-KNSNKC 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 101/202 (50%)
Rab13NP_112354.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 92/168 (55%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 31..45 7/13 (54%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 63..80 13/16 (81%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 173..203 8/29 (28%)

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