DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and Rab18

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_001265376.1 Gene:Rab18 / 19330 MGIID:102790 Length:212 Species:Mus musculus


Alignment Length:203 Identity:87/203 - (42%)
Similarity:122/203 - (60%) Gaps:20/203 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KLLIIGDSGVGKSSLLIRFSDDTFSGSYITTI------GVDFKIRTVDIEGMRVKLQIWDTAGQE 68
            |:||||:|||||||||:||:||||......||      |||||::|:.::|.:.||.||||||||
Mouse    10 KILIIGESGVGKSSLLLRFTDDTFDPELAATIEFSFLQGVDFKVKTISVDGNKAKLAIWDTAGQE 74

  Fly    69 RFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNC---DVVKKVLVGNKNDDPDRKVV 130
            ||||:|.:||||..|||:|||||..::|..:..||.|::..|   |:| .:|||||.|..:|:|.
Mouse    75 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIV-NMLVGNKIDKENREVD 138

  Fly   131 ITEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLDHKLRTSP----NEQQKDTLHLKPNP 191
            ..| ..:||::..:...|.|||....|:..|..:..:::.     :|    :|.|...:.|....
Mouse   139 RNE-GLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQ-----TPGLWESENQNKGVKLSHRE 197

  Fly   192 KGSKGGKC 199
            :...||.|
Mouse   198 ESRGGGAC 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 87/203 (43%)
Rab18NP_001265376.1 Rab18 9..175 CDD:206656 80/166 (48%)

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