DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and RabX4

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:XP_308884.2 Gene:RabX4 / 1270205 VectorBaseID:AGAMI1_005765 Length:219 Species:Anopheles gambiae


Alignment Length:218 Identity:90/218 - (41%)
Similarity:138/218 - (63%) Gaps:20/218 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MARGFDHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTA 65
            ||..|...:|:|::|||.|||:.::.|:.|:.:..:||:|||:|||.:.::::|:.:||||||||
Mosquito     1 MALDFAATYKVLVLGDSNVGKTCIVHRYCDERYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTA 65

  Fly    66 GQERFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNC--DVVKKVLVGNKND-DPDR 127
            |||||||:|:.||||..|::::||||:.|||.|:..||..||.|.  ||| |||.|||.: :|.:
Mosquito    66 GQERFRTLTTAYYRGAMGILLMYDVTSLESFNNLSYWLRNIQENAAPDVV-KVLAGNKCECNPPQ 129

  Fly   128 KVVITEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLDHKLRTSPN----EQQKDTLHLK 188
            :.|..|..::.|:..|:..||.|.|.|||:|:.||::.|::.:.:.....|    ::||....:.
Mosquito   130 RAVDKERGEKIAENFDMPFFEVSCKQNINIEDAFLTLARKIREQREHRGENFDDGDRQKGLQDMI 194

  Fly   189 PNPKGSK------------GGKC 199
            .|..||.            ||:|
Mosquito   195 KNGPGSNGLGPFTLGSGGDGGRC 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 88/216 (41%)
RabX4XP_308884.2 RAB 9..170 CDD:197555 78/161 (48%)

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