DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and rab3c

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:XP_002938225.2 Gene:rab3c / 100496123 XenbaseID:XB-GENE-494770 Length:227 Species:Xenopus tropicalis


Alignment Length:169 Identity:84/169 - (49%)
Similarity:121/169 - (71%) Gaps:1/169 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RGFDHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQ 67
            :.||::|||||||:|.|||:|.|.|::||:|:.::::|:|:|||::||.....|:||||||||||
 Frog    25 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQ 89

  Fly    68 ERFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQN-NCDVVKKVLVGNKNDDPDRKVVI 131
            ||:||||:.||||..|.|::||:||.|||..|:.|..:|:. :.|..:.:|||||.|..|.:|:.
 Frog    90 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDMEDERVIS 154

  Fly   132 TEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLD 170
            .|..:..|:|:..|.||.||||||||:..|..:...:.|
 Frog   155 AERGKHLAEQLGFEFFEASAKDNINVKQTFERLVDIICD 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 84/169 (50%)
rab3cXP_002938225.2 Rab3 30..194 CDD:206657 82/164 (50%)

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