DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and rab3b

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_001093746.1 Gene:rab3b / 100101786 XenbaseID:XB-GENE-483427 Length:217 Species:Xenopus tropicalis


Alignment Length:194 Identity:86/194 - (44%)
Similarity:127/194 - (65%) Gaps:11/194 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RGFDHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQ 67
            :.||::|||||||:|.|||:|.|.|::||||:.::::|:|:|||::||.....||||||||||||
 Frog    17 QNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTSAFVSTVGIDFKVKTVYRNDKRVKLQIWDTAGQ 81

  Fly    68 ERFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQN-NCDVVKKVLVGNKNDDPDRKVVI 131
            ||:||||:.||||..|.|::||:|:..|:..|:.|..:|:. :.|..:.:|||||.|..:.:|:.
 Frog    82 ERYRTITTAYYRGAMGFILMYDITSESSYNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVIA 146

  Fly   132 TEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLDHKLRTSPNEQQKDTLHLKPNPKGSK 195
            .|..:..|.|:..|.||.|||:||.|:.:|..:...:.| |:..|.:..|         |.|.|
 Frog   147 PEKGKHLADQLGFEFFEASAKENIQVKQVFERLVDIICD-KMSESLDTDQ---------PPGGK 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 86/194 (44%)
rab3bNP_001093746.1 Rab3 22..186 CDD:206657 78/164 (48%)

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