DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hers and EBS

DIOPT Version :10

Sequence 1:NP_608360.2 Gene:Hers / 33000 FlyBaseID:FBgn0052529 Length:2529 Species:Drosophila melanogaster
Sequence 2:NP_193945.2 Gene:EBS / 828303 AraportID:AT4G22140 Length:234 Species:Arabidopsis thaliana


Alignment Length:182 Identity:46/182 - (25%)
Similarity:73/182 - (40%) Gaps:36/182 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly  2368 IIRIRDCVLLKANEDNELPYVAKVAHLWQNPEDGEMMMSLLWYYRPEHTDQGRQRNDCPDEVYAS 2432
            ::|..||||::.::..:.||||:|..:..:..: .:.:...||||||.:..||::.....|::.|
plant    30 VVRAGDCVLMRPSDAGKPPYVARVEKIEADARN-NVKVHCRWYYRPEESLGGRRQFHGAKELFLS 93

  Fly  2433 RHRDHNSVACVEDKCYVLTFSE------------YCRYRRRLRAAEEDVEDVSIVPRRPSIATAP 2485
            .|.|..|...:|.||.|.||..            |||:..:....       :..|.|.::....
plant    94 DHFDVQSAHTIEGKCIVHTFKNYTRLENVGAEDYYCRFEYKAATG-------AFTPDRVAVYCKC 151

  Fly  2486 GFPVRTVPEHTNPELVMF----CRRAYE-----FRTRRLLKLPHKNGLVCSS 2528
            ..|.       ||:.:|.    |:..|.     .......||.|.....|||
plant   152 EMPY-------NPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDHFVCAECSS 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HersNP_608360.2 BAH_BAHCC1 2366..2519 CDD:240065 41/171 (24%)
EBSNP_193945.2 BAH_BAHCC1 30..164 CDD:240065 38/148 (26%)
PHD_SF 148..194 CDD:473978 9/52 (17%)

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