DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hers and Bahd1

DIOPT Version :10

Sequence 1:NP_608360.2 Gene:Hers / 33000 FlyBaseID:FBgn0052529 Length:2529 Species:Drosophila melanogaster
Sequence 2:XP_006499328.1 Gene:Bahd1 / 228536 MGIID:2139371 Length:781 Species:Mus musculus


Alignment Length:871 Identity:231/871 - (26%)
Similarity:329/871 - (37%) Gaps:235/871 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  1715 CQMLVKTELKGENPQVTKMQYEAHVMPP--PTPPESYCASDE--------------------KLL 1757
            |::|: |.|  ||....:...||..:||  |.||....:|::                    .||
Mouse    79 CKVLL-TRL--ENVAGPRSADEADELPPDLPKPPSPTSSSEDAGLVQPRKRRLASLNAEALNNLL 140

  Fly  1758 DDQEQEAELELRLRLGLGLEKSHGGQQHIEAYDLTCSTPPPVTVPQAAAVPRKARIGKSMAREMV 1822
            .::|:.:.|       .|..:|.||..|......|.|.      ..:...||...:|:. :|:: 
Mouse   141 LEREETSSL-------AGARRSRGGDPHRSRDRATGSW------SFSKKRPRLGDLGEG-SRDL- 190

  Fly  1823 YAAQQQLLPEKQLKQ-----PKEAAA-------KLEAEPEMPFVLKAEIKAETKIKIEHDGEAQA 1875
               ..:|.|::..::     ||..|:       ||..|.|:|.       ..::.:.|.||.   
Mouse   191 ---SPELAPDEGARRDGDPAPKRLASLNAAAFLKLSQERELPL-------RPSRAQAEADGR--- 242

  Fly  1876 STHISQLPDLKPTIKTEPEQELEQEAASVPSVA--KTEPQPEVEVEREQQEPPVDEEQQPT---P 1935
            ||.......|:|.:..:...:..|.|.|..:..  ..:.||.   ||....||.....||:   |
Mouse   243 STEPLAPRILRPKVNGKNCPKARQGAGSGEATGPPNWQEQPN---ERWPSAPPHGPPTQPSHQAP 304

  Fly  1936 GGSKQ---RFNLLALSSGNKKTKTNNSYKSLIKQAEPKSYLCPGRRFIRRHGRAPAKYVKRRQMI 1997
            |.:.:   |.||..|..|....|           .||..   ||.       .:||         
Mouse   305 GKALENPLRPNLPLLMGGQAALK-----------PEPGR---PGE-------ESPA--------- 339

  Fly  1998 LTQRQQQRMRLQRREQQQQRRQQREAAAEVVAGAVVTP-SLAGNPIEQAGSEVSIVKDQAPNSSA 2061
                           .:|:..|....|.:      ::| .:.|||.:.:|               
Mouse   340 ---------------PKQELHQPSFPAPQ------LSPLPMPGNPADYSG--------------- 368

  Fly  2062 TPSASPKRARPRKQEIAAL---HLLEGLDTTLSRGYFSDPELNHSSRKQAPTAV--GGLYAASSP 2121
             |...|        |:.||   :|..|.|......|...|.|...  |.:|.|.  .||..|.|.
Mouse   369 -PCGGP--------ELTALGSFYLYCGQDGLQCGAYSPCPMLPEG--KLSPVAAPNEGLLMAPSS 422

  Fly  2122 LTTATDHRGKQTTAEKRSKSETKKPPSGESSESGLPCKKPRKEPAGKVKGKGKKTTAGAAATTIA 2186
            :.:....:....:|.:...|| ....:|.|....||.....   .|        ||.|.....:.
Mouse   423 VPSGVPFQHPPWSAPRYCSSE-DTGANGYSICGVLPLSLTH---IG--------TTCGGCPYKMP 475

  Fly  2187 STAETQTEAVNAITASNQETNNNEYQTADL-----QAQKFRECPAVTDAKVAGTATSTSTASQQQ 2246
            .|||           ..:.....|:...:.     .|.....||..:....|.......|..   
Mouse   476 FTAE-----------GCRSLGQLEFPLPEAGHPASPAHPLLGCPVPSVPPAAEPIPHLQTPI--- 526

  Fly  2247 NQQHSDEQHQFLVPSQPATASATAALAATPPP-SRQGQATHTKRTRSRCKFGNRKRQRHRPGGVS 2310
                          |:|.|.:.....:|.||. |:.|     .||.|.|:...|.:...||.   
Mouse   527 --------------SEPQTVARACPQSAKPPSGSKSG-----LRTGSSCRHAVRSKAARRPS--- 569

  Fly  2311 YELDVTQPPATKANVVP-----KWNNGWMWAGKAFQGAVFLNSDDPLVLRTCYPAM-RHVEGDII 2369
               ...||.|.:..  |     :..|||:..|.|.:.||::..:....:|..|.|: ||  |:.|
Mouse   570 ---HPKQPRAQRPR--PRRRRRRRTNGWVPVGAACEKAVYVLDEPEPAIRKSYQAVERH--GETI 627

  Fly  2370 RIRDCVLLKAN-EDNELPYVAKVAHLWQNPEDGEMMMSLLWYYRPEHTDQGR---QRNDCPDEVY 2430
            |:||.||||:. .....|||||::.||:|||.||:||||||||||||...||   ......:||:
Mouse   628 RVRDTVLLKSGPRKTSTPYVAKISALWENPESGELMMSLLWYYRPEHLQGGRSPSMHEPLQNEVF 692

  Fly  2431 ASRHRDHNSVACVEDKCYVLTFSEYCRYRRRLRAAEEDV--EDVSIVPRRPSIATAPGFPVRTVP 2493
            ||||:|.|||||:|:|||||||:||||:....:...|.:  ...::||.....:|.|.   ||||
Mouse   693 ASRHQDQNSVACIEEKCYVLTFAEYCRFCAMAKRRGEGLPSRKTALVPPSADYSTPPH---RTVP 754

  Fly  2494 EHTNPELVMFCRRAYEFRTRRLLKLP 2519
            |.|:||||..||..|:||..|:||.|
Mouse   755 EDTDPELVFLCRHVYDFRHGRILKNP 780

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HersNP_608360.2 BAH_BAHCC1 2366..2519 CDD:240065 82/158 (52%)
Bahd1XP_006499328.1 PHA03247 <158..378 CDD:223021 61/318 (19%)
PHA03307 288..>572 CDD:223039 79/411 (19%)
BAH_BAHCC1 624..734 CDD:240065 60/109 (55%)

Return to query results.
Submit another query.