DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abcd3 and Abcd3

DIOPT Version :10

Sequence 1:NP_608354.1 Gene:Abcd3 / 32992 FlyBaseID:FBgn0031069 Length:665 Species:Drosophila melanogaster
Sequence 2:NP_033017.2 Gene:Abcd3 / 19299 MGIID:1349216 Length:659 Species:Mus musculus


Alignment Length:78 Identity:23/78 - (29%)
Similarity:28/78 - (35%) Gaps:22/78 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FLFTQAVFYLNFYLLHSIFV------SKKLAKKPDLVLIYFRFSVDMVYSFFGNSNCTHRLNYHI 71
            ||...|:..|.|.|| .||:      |||..||.|               ...:||||.....|.
Mouse  1854 FLVVIALVGLIFILL-LIFILIIRGQSKKYTKKTD---------------SGAHSNCTSLPLSHG 1902

  Fly    72 HIQFSSFSNFPAI 84
            .:.......|||:
Mouse  1903 EMVRLDEGRFPAL 1915

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abcd3NP_608354.1 3a01203 3..653 CDD:273360 23/78 (29%)
Abcd3NP_033017.2 3a01203 1..647 CDD:273360
Interaction with PEX19. /evidence=ECO:0000250|UniProtKB:P28288 1..61
Blue background indicates that the domain is not in the aligned region.

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