DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abcd3 and Pmp70

DIOPT Version :10

Sequence 1:NP_608354.1 Gene:Abcd3 / 32992 FlyBaseID:FBgn0031069 Length:665 Species:Drosophila melanogaster
Sequence 2:XP_310656.2 Gene:Pmp70 / 1271802 VectorBaseID:AGAMI1_007811 Length:659 Species:Anopheles gambiae


Alignment Length:665 Identity:498/665 - (74%)
Similarity:572/665 - (86%) Gaps:6/665 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAPALSKLANNQSAIVGVAGMTAALWIIAYGKMSNKKRKPGYEDKIQYTIAEKKDKKAGKAHVNS 65
            |||.||||..||:|:|||||.|||..||.|||..:|.||...||:|||.|::||:|::.|||||:
Mosquito     1 MAPNLSKLLGNQNAVVGVAGCTAAACIILYGKQIHKNRKQRPEDEIQYLISDKKEKRSPKAHVNA 65

  Fly    66 VFFKQLRQLLPILIPGFWSVETGLLFLVAAALIGRSVSDIWMIQNATVVESTIIHMNRTKFKTAL 130
            |||.|||.||.|:||..||||.|||.::|.:||.|||||||||||||.:|||||.||:.:|:|||
Mosquito    66 VFFNQLRTLLGIIIPKKWSVENGLLVVIALSLIARSVSDIWMIQNATAIESTIITMNKKQFRTAL 130

  Fly   131 LKYLTALPAISVVTNVLKWSLGELKLRFRTNLTHHLYSQYLNGYTYYKMSNLDNRIANADQLLTT 195
            :|||:|||||:||.||||||:|||||||||||:.:||::||.|:|||||||||||||||||||||
Mosquito   131 VKYLSALPAIAVVNNVLKWSIGELKLRFRTNLSQYLYNEYLKGFTYYKMSNLDNRIANADQLLTT 195

  Fly   196 DIDKFCESATDLYSNISKPVLDIFIYVYRLTVNLGGKTPSILMLYLLFAGVFLTRLRRPTGRLTV 260
            ||||||||.|||||||.||:|||.|||||||.||||.||.||:|||.|:|||||.||:|||||||
Mosquito   196 DIDKFCESVTDLYSNICKPLLDIVIYVYRLTTNLGGTTPGILLLYLFFSGVFLTNLRKPTGRLTV 260

  Fly   261 EEQKLEGEFRYVNSRLITNSEEVAFYQGNVREKLTLLASYSKLRSHLRKFLEFRVSMGIIDNIIG 325
            .|||||||||||||||||||||:|||:||.|||||:|||::||..||||||||||.|||:||::.
Mosquito   261 LEQKLEGEFRYVNSRLITNSEEIAFYKGNNREKLTILASFNKLVGHLRKFLEFRVGMGIVDNMVA 325

  Fly   326 KYFASIVGFYAVSIPFFSENHPLLSGENSGQRLQAYYTYGRMLVKLAEAIGRLVLAGREMSRLAG 390
            ||.|::|||||||:|||.::||||:|....:||..|||:||||||||||||||||||||||||||
Mosquito   326 KYIATVVGFYAVSLPFFEKDHPLLTGSQQSERLSRYYTFGRMLVKLAEAIGRLVLAGREMSRLAG 390

  Fly   391 FTARMTELIKVLSDLNKGTYERTMVNGNNLAQNAVGSASSNFGPNKGIMCFEDNIIRFEKVPLVT 455
            ||||||||..||.|||.|.|||||||.:.:|.      :.:.||.:|::.|:||:|:||.|||||
Mosquito   391 FTARMTELTVVLKDLNSGRYERTMVNNSAIAD------AGDIGPGRGLLKFQDNLIKFEHVPLVT 449

  Fly   456 PNGDVLLQELSFEVKSGTNVLVCGPNGCGKSSLFRILGELWPTWGGKVTKPSRGKLFYVPQRPYM 520
            ||||||:::|:||||||.|||||||||||||||||||||||||||||||||..|||||:||||||
Mosquito   450 PNGDVLVKDLTFEVKSGMNVLVCGPNGCGKSSLFRILGELWPTWGGKVTKPPAGKLFYIPQRPYM 514

  Fly   521 TLGTLRDQIIYPHTRDDMRRLGHSDEDLMHYLDIVQLTYLEQRENGLDSIEDWIDVLSGGEKQRI 585
            |||:||||||||||..:|:|.|.:|.||:.|||:||||||:.||.|||:||||||||||||||||
Mosquito   515 TLGSLRDQIIYPHTHQEMKRRGKTDADLLKYLDLVQLTYLQVREKGLDAIEDWIDVLSGGEKQRI 579

  Fly   586 AMARLFYHKPQFAILDECTSAVSVDVEGKMYSYCREVGITLFTVSHRKSLWAHHDYYLQFDGRGS 650
            ||||||||.|||||||||||||||||||.||.|||.|||||||||||||||.||||||:|||.|:
Mosquito   580 AMARLFYHNPQFAILDECTSAVSVDVEGSMYQYCRAVGITLFTVSHRKSLWTHHDYYLKFDGHGA 644

  Fly   651 YEFATIDQDKDHFGS 665
            |||..|:..:|.|||
Mosquito   645 YEFGPIEGTQDQFGS 659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abcd3NP_608354.1 3a01203 3..653 CDD:273360 489/649 (75%)
Pmp70XP_310656.2 3a01203 34..647 CDD:273360 468/618 (76%)

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