DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14227 and Tmprss13

DIOPT Version :10

Sequence 1:NP_608345.2 Gene:CG14227 / 32978 FlyBaseID:FBgn0031058 Length:286 Species:Drosophila melanogaster
Sequence 2:XP_063121182.1 Gene:Tmprss13 / 300682 RGDID:1310872 Length:552 Species:Rattus norvegicus


Alignment Length:235 Identity:62/235 - (26%)
Similarity:100/235 - (42%) Gaps:30/235 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 PWIVSVIVNGKAKCSGSLINHRFVLTAAHCVF--REAMQVHLGDFDAWNPGQNCSSGARLSNAYC 119
            ||.||:.......|.|:||:.::|||||||.|  ||.:      .:.|......|:..:|..|  
  Rat   323 PWQVSLHFGTTHICGGTLIDAQWVLTAAHCFFVTREKI------LEGWKVYAGTSNLHQLPEA-- 379

  Fly   120 VRIDKKIVHAGFGKIQAQQYDIGLLRMQHAVQYSDFVRPICLLINEPVAAIDRFQLTVW----GT 180
            ..|.:.|::..:...| ..|||.|:|:...:..|..:.|.||.::.....::.   |.|    |.
  Rat   380 ASISQIIINGNYTDEQ-DDYDIALVRLSKPLTLSAHIHPACLPLHGQTFGLNE---TCWITGFGK 440

  Fly   181 TAEDFRSIPRVLKHSVGDRIDRELCT--LKFQQQVDESQICVHTETS--HACKGDSGGPFSAKIL 241
            |.|........|:....:.||.:.|.  |.:...:....:|......  .:|:||||||    ::
  Rat   441 TKETDEKTSPFLREVQVNLIDFKKCNDYLVYDSYLTPRMMCAGDLRGGRDSCQGDSGGP----LV 501

  Fly   242 YGGTYRTFQFGIIIFGLSSCAGLS---VCTNVTFYMDWIW 278
            .....|.:..|:..:| :.|...:   |.|.||..:.||:
  Rat   502 CEQNNRWYLAGVTSWG-TGCGQKNKPGVYTKVTEVLPWIY 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14227NP_608345.2 Tryp_SPc 57..277 CDD:214473 60/232 (26%)
Tmprss13XP_063121182.1 None

Return to query results.
Submit another query.