Protein Alignment Ubqn and ubqln4

DIOPT Version :10

• Sequence 1: NP_608344.1
• Gene: Ubqn / 32977
• FlyBaseID: FBgn0031057
• Length: 547
• Species: Drosophila melanogaster
• Sequence 2: NP_998521.2
• Gene: ubqln4 / 334337
• ZFINID: ZDB-GENE-030131-6269
• Length: 599
• Species: Danio rerio
• Alignment Length: 586
• Identity: 282/586 - (48%)
• Similarity: 383/586 - (65%)
• Gaps: 72/586 - (12%)

  Fly     9 INVVVKTPKDKKTVEVDEDSGIKDFKILVAQKFEAEPEQLVLIFAGKIMKDTDTLQMHNIKDNLT 73
            |.|.|||||||:.:.:.||:.:..||..::::|:|:.:||||||||||:||.|||..|.|||.||
Zfish    26 IKVTVKTPKDKEEIAIAEDASVAQFKEEISKRFKAKQDQLVLIFAGKILKDGDTLGQHGIKDGLT 90

  Fly    74 VHLVIKAPTRNNEQPARQ---------------------PADVRQTPFG-------------LNQ 104
            ||||||...:.:...:.|                     ||....||.|             |..
Zfish    91 VHLVIKTAQKTSGAGSSQTSASSGPGPSQGSPSGTDTPSPAGNLGTPQGSGPSPTPSQPANILAG 155

  Fly   105 FGGLAGMEALGAGSNTFMDLQARMQNELLNNGDMLRSLMDNPMVQQMMNNPDTMRQLITSNPQMH 169
            ||.|:|:..||.||..||:||.:||.:|::|.:||..:|:||:||.||:|||.|||:|.:||||.
Zfish   156 FGDLSGLSNLGMGSANFMELQQQMQRQLMSNPEMLSQIMENPLVQSMMSNPDLMRQMIMANPQMQ 220

  Fly   170 DLMQRNPEISHMLNNPDLLRQTMELARNPSMLQELMRSHDRAMSNLESVPGGYSALQRIYRDIQE 234
            .||:||||||||||||:|:||||||||||:|:||:||:.|||:|||||:||||:||:|:|.||||
Zfish   221 QLMERNPEISHMLNNPELMRQTMELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQE 285

  Fly   235 PMMNAATESFGRNPFAGLVDGGGSGAGNNPQQGTENRNPLPNPWGGANSGTNGTVGGSGAGNP-- 297
            ||.:||.|.||.|||:.| .|.|...|..|.: ||||.|||||||    ..:||...:.:|.|
Zfish   286 PMFSAAREQFGNNPFSAL-GGNGENPGTQPSR-TENREPLPNPWG----PPDGTASTTSSGTPTT 344

  Fly   298 ----TGDLPP--------------NNVLNTPAMRSLLQQMADNPAMMQNLLNAPYTRSMMESMSQ 344
                |....|              |.:.|:|.|:||:||:::||.:|||:::|||.|:||:|::|
Zfish   345 TSSTTSSTTPSVSNPLGISSSNLGNGMFNSPGMQSLMQQISENPQLMQNMISAPYMRTMMQSLAQ 409

  Fly   345 DPDMAARLLSSSPLMSNNPALQEQVRQMMPQFMAQMQNPEVMNMLTNPDAMNAILQIQQGMEQLR 409
            :||:|:::|.::||.:.||.||||:||.:|.|:.||||||.::::|||.||.|::|||:|::.|:
Zfish   410 NPDVASQVLMNNPLFAGNPQLQEQMRQQLPVFLQQMQNPEALSVMTNPRAMRALMQIQEGLQTLQ 474

  Fly   410 SAAPGLVGTLGIPPPPPGAGTGTNPASGDGSGGNSGASTNNVSPSSGLNAGTG-TPNLAPGGGPN 473
            :.||||:..||     ||...|..|....|:...:|.:   |:|.:...:|.| ||....|..|.
Zfish   475 TEAPGLMPGLG-----PGGMPGGIPVGMPGAPLPTGVT---VTPENPPPSGQGSTPTPTAGASPA 531

  Fly   474 AQLFNDFMMRMLNGMSNNADNTQPPEVRYQSQLEQLNAMGFVNRDANLQALIATFGDINAAVERL 538
            .|   ..|.:||...:..:.:||.||||:|.|||||:||||:||:|||||||||.||||||:|||
Zfish   532 QQ---QLMQQMLQMFAGGSASTQTPEVRFQQQLEQLSAMGFINREANLQALIATGGDINAAIERL 593

  Fly   539 L 539
            |
Zfish   594 L 594

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubqn	NP_608344.1	Ubl_PLICs	7..79	CDD:340506	40/69 (58%)
		PABP-1234	<233..409	CDD:130689	87/195 (45%)
		UBA_PLICs	501..537	CDD:270582	28/35 (80%)
ubqln4	NP_998521.2	Ubl_PLICs	25..96	CDD:340506	40/69 (58%)
		rad23	26..311	CDD:273167	148/285 (52%)
		UBA_PLICs	556..595	CDD:270582	32/39 (82%)