Protein Alignment Rcd-1 and cnot9

DIOPT Version :10

• Sequence 1: NP_608335.1
• Gene: Rcd-1 / 32966
• FlyBaseID: FBgn0031047
• Length: 304
• Species: Drosophila melanogaster
• Sequence 2: NP_999925.1
• Gene: cnot9 / 406632
• ZFINID: ZDB-GENE-030131-1558
• Length: 298
• Species: Danio rerio
• Alignment Length: 282
• Identity: 221/282 - (78%)
• Similarity: 249/282 - (88%)
• Gaps: 3/282 - (1%)

  Fly    23 QTEQEKVYQWINELAHPDTRETALLELSKKRE--TDLAPMLWNSFGTACALLQEIVNIYPSITPP 85
            |.::||:|||||||:.|:|||.||||||||||  ||||||||:|.||..|||||||||||||.||
Zfish    15 QVDREKIYQWINELSSPETRENALLELSKKRESVTDLAPMLWHSCGTIAALLQEIVNIYPSINPP 79

  Fly    86 TLTAHQSNRVCNALALLQCVASHPETRTAFLQAQIPLYLYPFLSTTSKTRPFEYLRLTSLGVIGA 150
            |||||||||||||||||||||||.|||:|||.|.|||:|||||.|.|||||||||||||||||||
Zfish    80 TLTAHQSNRVCNALALLQCVASHVETRSAFLAAHIPLFLYPFLHTVSKTRPFEYLRLTSLGVIGA 144

  Fly   151 LVKTDEQEVITFLLTTEIVPLCLSIMDSGSELSKTVATFIIQKILLDESGLSYICQTYERFSHVA 215
            ||||||||||.|||||||:||||.||:|||||||||||||:||||||::||:|||||||||||||
Zfish   145 LVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDTGLAYICQTYERFSHVA 209

  Fly   216 ITLGKMVIQLAKDPCARLLKHVVRCYLRLSDNTRARKALGQCLPDQLRDGTFALCLQEDKSTKQW 280
            :.|||||:||:|:|.|||||||||||||||||:|||:||.|||||||:|.|||..|::|.:||:|
Zfish   210 MILGKMVLQLSKEPSARLLKHVVRCYLRLSDNSRAREALRQCLPDQLKDTTFAQVLKDDSTTKRW 274

  Fly   281 LQMLLKNLELGATPQQIGMSPL 302
            |..|:|||:.|......|: ||
Zfish   275 LAQLVKNLQEGQVTDPRGI-PL 295

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rcd-1	NP_608335.1	Rcd1	32..288	CDD:461160	210/257 (82%)
cnot9	NP_999925.1	Rcd1	24..282	CDD:461160	210/257 (82%)