DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14207 and hsp30d

DIOPT Version :10

Sequence 1:NP_728275.1 Gene:CG14207 / 32955 FlyBaseID:FBgn0031037 Length:192 Species:Drosophila melanogaster
Sequence 2:XP_002937646.1 Gene:hsp30d / 100489362 XenbaseID:XB-GENE-5917036 Length:215 Species:Xenopus tropicalis


Alignment Length:164 Identity:50/164 - (30%)
Similarity:79/164 - (48%) Gaps:19/164 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 EMRKMEEEMAKFRHELMNREANFFESTSSTKKTTTTSSTTNSALPSRIPKQQNYVSDISSPLIQD 97
            ::..|..:|.: |.:.:|............::.|..|....:|           .::.:||....
 Frog    38 DILSMRNDMER-RMQCVNEAYRLLSQDMDMRRITDQSRQPRAA-----------ETEGTSPSSGK 90

  Fly    98 EGDNKVLKLRFDVSQYAPEEIVVKTVDQKLLVHAKHEEKSDTKS-----VYREYNREFLLPKGVN 157
            :|.:. .:|..||..::|.|:.||...::::|..|.|.|||::.     .|||:.||..||:|||
 Frog    91 DGKDH-FELTLDVRDFSPHELTVKMQGRRVIVTGKQERKSDSEDGSYFHEYREWKREAELPEGVN 154

  Fly   158 PESIRSSLSKDGVLTVDAPLPAL-TAGETLIPIA 190
            ||.:..|.||||.|.:.||..|| .|.|..|||:
 Frog   155 PEQVVCSFSKDGHLHIQAPRLALPPAPERPIPIS 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14207NP_728275.1 metazoan_ACD 96..177 CDD:107247 33/85 (39%)
hsp30dXP_002937646.1 ACD_HspB9_like 88..174 CDD:107236 33/86 (38%)

Return to query results.
Submit another query.