DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14220 and Suds3

DIOPT Version :10

Sequence 1:NP_608325.1 Gene:CG14220 / 32954 FlyBaseID:FBgn0031036 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_001418749.1 Gene:Suds3 / 360819 RGDID:1305986 Length:388 Species:Rattus norvegicus


Alignment Length:370 Identity:137/370 - (37%)
Similarity:208/370 - (56%) Gaps:71/370 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 DDESI----GDER------SEEDTDDASETEFRSPSRYGAMNGTSNSNNMGTNSELKEQMYQHKL 69
            |||.:    .|||      |:|||:|||||:.........:             |:||||||.||
  Rat    26 DDEELESVEDDERSCRGRESDEDTEDASETDLAKHDEEDYV-------------EMKEQMYQDKL 77

  Fly    70 FNLQKQMEELGQLVHPEYLKRVKKLDSQLKERRRMNEVYKEYMRECVERDYVLEKMAAQKEYDEK 134
            .:|::|:::|.:....||.||:||||.|.:||.|..|::.:...|.|||:|:.||.||.||:::|
  Rat    78 ASLKRQLQQLQEGTLQEYQKRMKKLDQQYRERIRNAELFLQLETEQVERNYIKEKKAAVKEFEDK 142

  Fly   135 MMDLKDNLISDFEDRKRQIENERFSIELTNDSMEIKTTITRKLRRRPNEPLPVIEKRRKPATGQL 199
            .::||:|||::.|::|:.||||:.::|||.||||:|..:|||||||||:|:|:.:||||||..| 
  Rat   143 KVELKENLIAELEEKKKMIENEKLTMELTGDSMEVKPIMTRKLRRRPNDPVPIPDKRRKPAPAQ- 206

  Fly   200 LVYQLDDKEIESDLKIIQR---------------------------GR-----PNPVPQQNGSGS 232
            |.|.|.|::|..||:.:.:                           ||     |..||..|.|..
  Rat   207 LNYLLTDEQIMEDLRTLNKLKSPKRPGLYCKGDLRLALGGSFCVGVGRTLGSGPFSVPLLNPSEI 271

  Fly   233 YGSGSQQQQSMHVL---AEPTSNSGL-----------VETRIEDNKLLYERRWFCRGQQVYVEGK 283
            ..|.:....::.:|   |.|:|...|           .|.||||.||.|::||:.:.|.:|:|.|
  Rat   272 SVSWAFWSSALALLVCEASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYHKSQAIYLESK 336

  Fly   284 EMSKFAATITAIGNEVVWVKRTNE-TKVKINMSHLAKGKISIKRR 327
            :..|.:..|:::|...:||::|:: ||::|.:..|.:|...|:||
  Rat   337 DNQKLSCVISSVGANEIWVRKTSDSTKMRIYLGQLQRGLFVIRRR 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14220NP_608325.1 Sds3 58..>166 CDD:430099 51/107 (48%)
Suds3NP_001418749.1 Sds3 62..>174 CDD:430099 51/124 (41%)

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