DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND-18 and ndufs4

DIOPT Version :10

Sequence 1:NP_573385.1 Gene:ND-18 / 32936 FlyBaseID:FBgn0031021 Length:183 Species:Drosophila melanogaster
Sequence 2:XP_002941075.1 Gene:ndufs4 / 100125122 XenbaseID:XB-GENE-947419 Length:169 Species:Xenopus tropicalis


Alignment Length:182 Identity:87/182 - (47%)
Similarity:114/182 - (62%) Gaps:21/182 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ALRQVMCRSTASLQLYQANRA-AAARWASTATDGGPLDPKTALARPEELEQRNKLSGKITVPTAV 66
            ||||::..|.....:..:||: :.:.|....|.          |:..:|         |||...:
 Frog     8 ALRQLLWGSRTVGAVINSNRSLSTSTWRLAQTQ----------AQDTQL---------ITVDEKM 53

  Fly    67 NLSPISGVPEEHIRERRVRIHIPPKNAMQSGTDNVNTWQIEFDNRERWENPLMGWASSGDPLSNM 131
            ::|.|||||||||:.|:|.|.:|.:||||||..|...|:||||.|||||||||||||:.||||||
 Frog    54 DISTISGVPEEHIKTRKVHIFVPARNAMQSGVQNTKRWKIEFDTRERWENPLMGWASTADPLSNM 118

  Fly   132 NVQFGSPEEAITFCERNGWRWYVDGAAKPKKERVKNYGINFAWNKRTRVSTK 183
            .:.|.|.|:||:|.|:|||.:.|:....| |.:.|:||.||:||||||||||
 Frog   119 LLSFSSKEDAISFAEKNGWSYEVEEKRIP-KPKSKSYGANFSWNKRTRVSTK 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-18NP_573385.1 NDUS4 83..175 CDD:461433 52/91 (57%)
ndufs4XP_002941075.1 NDUS4 70..161 CDD:461433 52/91 (57%)

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