DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hs3st-B and Ndst3

DIOPT Version :10

Sequence 1:NP_573370.1 Gene:Hs3st-B / 32918 FlyBaseID:FBgn0031005 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_112463.2 Gene:Ndst3 / 83398 MGIID:1932544 Length:873 Species:Mus musculus


Alignment Length:317 Identity:100/317 - (31%)
Similarity:150/317 - (47%) Gaps:58/317 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 PPAQTVTSSLDGAP-KYQLLRQQGLRPSRH------------LPDTLIIGVKKSGTRALLEFIRL 153
            ||||......:..| :...|.|......||            ||..|:||.:|:||.||..|:.:
Mouse   553 PPAQLAHKYFELFPDQKDPLWQNPCDDKRHRDIWSKEKTCDRLPKFLVIGPQKTGTTALCLFLIM 617

  Fly   154 HPDVRA------AGSEVHFFDR-HYQRGLRWYRHHMPYTIEGQIT----MEKTPSYFVTKEVPQR 207
            ||.:.:      :..||.||:| :|.||:.||....|  :...:|    .||:.:||.:::.|:|
Mouse   618 HPSILSNSPSPKSFEEVQFFNRNNYHRGIDWYMDFFP--VPSNVTTDFLFEKSANYFHSEDAPKR 680

  Fly   208 VYHMNPATKLLIVVRDPVTRAISDYTQAASKKADMKLFEQLAFVNGSYSVVDTNWGP-------- 264
            ...:.|..|::.::.||..||.|.|....|.:....|  :.:|    |.|:..  ||        
Mouse   681 AASLVPKAKIITILIDPSDRAYSWYQHQRSHEDPAAL--KFSF----YEVISA--GPNAPWELRT 737

  Fly   265 -----VKIGVYARYLERWLLYFPLSQLLFISGERLIMDPAYEIGRVQDFLGLKRVVTEKHFY--- 321
                 :..|.||.::||||:|||..|||.|.|::|...||..:..||.|||    |:..:.|   
Mouse   738 LQKRCLVPGWYANHIERWLVYFPPFQLLIIDGQQLRTTPATVMDEVQKFLG----VSPHYNYSEA 798

  Fly   322 --FNATKGFPCLFKSEARSTPHCLGKTKGRNHPHIDPGAIERLREFYRPFNNKFYQL 376
              |::.|||.|....|.::  .||||:|||.:|.:|..:...|..:||..|.:..:|
Mouse   799 LTFDSHKGFWCQLLEEGKT--KCLGKSKGRKYPPMDSDSRAFLSSYYRDHNVELSKL 853

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hs3st-BNP_573370.1 Sulfotransfer_1 131..368 CDD:425820 88/265 (33%)
Ndst3NP_112463.2 Heparan sulfate N-deacetylase 3 36..589 9/35 (26%)
HSNSD 76..506 CDD:463450
Heparan sulfate N-sulfotransferase 3 590..873 91/280 (33%)
Sulfotransfer_1 595..846 CDD:425820 89/266 (33%)
Blue background indicates that the domain is not in the aligned region.

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