DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mec2 and nphs2

DIOPT Version :10

Sequence 1:NP_573357.1 Gene:Mec2 / 32905 FlyBaseID:FBgn0030993 Length:350 Species:Drosophila melanogaster
Sequence 2:XP_017949096.1 Gene:nphs2 / 100498000 XenbaseID:XB-GENE-485101 Length:376 Species:Xenopus tropicalis


Alignment Length:295 Identity:131/295 - (44%)
Similarity:188/295 - (63%) Gaps:16/295 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 TTQQYRGFKTSENEPKG--CMEWVVTLFSVLIFIITSPIAIFICFKVVAEYERAIIFRLGR-LSG 108
            |:|:..|.|     |.|  ..|.::....:|:.|:|.|::|:.|.|||.|||||:|||||| |||
 Frog    80 TSQKDDGVK-----PAGFRVFEGLLIFCCLLLVILTLPLSIWFCVKVVREYERAVIFRLGRMLSG 139

  Fly   109 GARGPGMFFILPCIDEYRKVDLRTVTFNVPQQEMLTKDSVTVTVDAVVYYRISDPLYAVIQVEDY 173
            .|||||:||.|||:|:..|||.|..||.||..:::|||.||:.:|.:.|||:.:....:..|...
 Frog   140 RARGPGLFFYLPCLDKCHKVDFRLKTFEVPFHQIVTKDLVTLEIDVICYYRLENACLFLTSVSSI 204

  Fly   174 SMSTRLLAATTLRNIVGTRNLSELLTERETLAHNMQATLDEATEPWGVMVERVEIKDVSLPVSMQ 238
            |.:.:||..||.:.::..|...::|.||:::...::..||.||..||:.|||.|||||.||..::
 Frog   205 SSAFQLLVQTTTKRLLAHRAFLDILLERKSIGEEVKVALDAATCHWGIKVERTEIKDVKLPEEVK 269

  Fly   239 RAMAAEAEAARDARAKVIAAEGEKKSATALKEASDVISASPSALQLRYLQTLSSISAEKNSTIIF 303
            ::||.||||.|.|:.|||||||||..:..:|.|::.:|.||:|:|||||.||..:::||.:|.:.
 Frog   270 QSMAVEAEAQRHAKVKVIAAEGEKTVSEYIKLAAEKLSGSPTAIQLRYLHTLQCMTSEKPATFVL 334

  Fly   304 PLPMELLTPYLAKYAHLMGPPPELKQSPE--KSDN 336
            |||.:|:.  |...|.|    ||:..:|.  ||||
 Frog   335 PLPFDLMN--LNAVARL----PEINPTPNTPKSDN 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mec2NP_573357.1 SPFH_like 107..314 CDD:473137 93/206 (45%)
nphs2XP_017949096.1 SPFH_podocin 116..338 CDD:259809 107/221 (48%)

Return to query results.
Submit another query.