DRSC/TRiP Functional Genomics Resources

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Protein Alignment: htk and ECM5

Sequence 1:NP_573330.3 Gene:htk FlyBaseID:FBgn0085451 Length:2486 Species:Drosophila melanogaster
Sequence 2:NP_013901.1 Gene:ECM5 SGDID:S000004788 Length:1411 Species:Saccharomyces cerevisiae

Alignment Length:292 Identity:60/293 (20%)
Similarity:118/293 (40%) Gaps:70/293 (24%)


  Fly   166 EVVNEKE------ENIGKVVCVETESKKKDK-EKW----------------------FPALVVAP 201
            |.||||.      ....|:..:|.|.:::.. ::|                      |.:...||
Yeast    16 EPVNEKVMVQNGFHESSKIADIELEIQERPSIKQWESPRSAVIPTSNHNFSPFLYTQFKSRGAAP 80

  Fly   202 TAQATVR----IRVKDEYLVRSF--KDGRYYTVPKKEATEFTREVASKQDVPAVQAALEFLDSSV 260
            .|..|::    :.:.:....|.|  |.|.:|.:.......|   :.:|:::|......|.::   
Yeast    81 FAPETIKSVDLVELPEGVPARVFHEKTGLFYQISPHSIPTF---ILAKKELPDPIKFYELVE--- 139

  Fly   261 LPAHWDRDSLFGLTNISSDDEGE------IDSD-----------SSDDEPHEEKDRFVAQLYKYM 308
                 |..|::|...:....:.:      :|.|           :|::....:...|.|:||.:.
Yeast   140 -----DLGSVYGCVKLKIIPDADKFTQLNVDVDRLWFKARKQFFNSNEFQRTKIVDFYAKLYNFH 199

  Fly   309 DD-RGTPLNKVPSILSRDVDLYRLFRAVQKRGGYNRVTSQNQWKLIAMRLGFTPCTVSVMNL-VK 371
            :. :.:.|.::|||..|.:|||||...|:.|||:|.|..:..|..|...||::...:|.::. ::
Yeast   200 NKIKKSTLTRIPSIDKRTLDLYRLRSCVKLRGGFNAVCEKKLWAQIGRELGYSGRIMSSLSTSLR 264

  Fly   372 QAYKKFLQPYGDFHRKLGCSMLMTSRNSNRSK 403
            .||.|.|..:..:..:     ...:||:.:::
Yeast   265 SAYAKILLDFDIYEEE-----EQAARNNEKNE 291

Known Domains:


GeneSequenceDomainRegion External IDIdentity
htkNP_573330.3 RBB1NT 171..262 CDD:285392 19/126 (15%)
ARID 299..381 CDD:279697 29/84 (35%)
Tudor-knot 692..751 CDD:288553
ECM5NP_013901.1 BRIGHT 187..280 CDD:128777 29/93 (31%)
cupin_like 512..662 CDD:304367
PHD_Ecm5p_Lid2p_like 1240..1287 CDD:276993
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 avgDist Average_Evolutionary_Distance R1374
TreeFam 00.000 Not matched by this tool.
11.030

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