DRSC/TRiP Functional Genomics Resources

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Protein Alignment: htk and AT1G02740

Sequence 1:NP_573330.3 Gene:htk FlyBaseID:FBgn0085451 Length:2486 Species:Drosophila melanogaster
Sequence 2:NP_171774.2 Gene:AT1G02740 AraportID:AT1G02740 Length:327 Species:Arabidopsis thaliana

Alignment Length:115 Identity:30/116 (26%)
Similarity:41/116 (35%) Gaps:44/116 (38%)


  Fly   715 YEAKVIEISVQRGVPMYLVHYTGWNNRYDEWVPRERIA----ENLTKGSKQKTRTISTSSANSGS 775
            |||||:::..:.....|.|||.|||..:|||:..:.:.    ||:   .|||.            
plant    67 YEAKVLKVEFKDNEWKYFVHYIGWNKSWDEWIRLDCLLKHSDENI---EKQKE------------ 116

  Fly   776 GGGGGGGGGGGGGGGGGGGSLLVQGSQPPGVSDKQPGKDGCSKMSPSSGN 825
                                   ||.:..|:......|  .|||.|.|.|
plant   117 -----------------------QGLKQQGIKSAMAWK--VSKMKPRSPN 141

Known Domains:


GeneSequenceDomainRegion External IDIdentity
htkNP_573330.3 RBB1NT 171..262 CDD:285392
ARID 299..381 CDD:279697
Tudor-knot 692..751 CDD:288553 15/36 (42%)
AT1G02740NP_171774.2 Tudor-knot 52..101 CDD:288553 15/34 (44%)
MRG 146..314 CDD:283390
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 D1624495at2759
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
11.010

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