DRSC/TRiP Functional Genomics Resources

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Protein Alignment htk and zgc:77151

DIOPT Version :10

Sequence 1:NP_573330.3 Gene:htk / 32877 FlyBaseID:FBgn0085451 Length:2486 Species:Drosophila melanogaster
Sequence 2:NP_991128.2 Gene:zgc:77151 / 337153 ZFINID:ZDB-GENE-030131-9097 Length:856 Species:Danio rerio


Alignment Length:626 Identity:113/626 - (18%)
Similarity:197/626 - (31%) Gaps:250/626 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   264 HWDRDSLFGLTNISSDDEGEIDSDSSDDEPHEEKDRFVAQLYKYMDDRGTPLNKVPSILSRDVDL 328
            |||.:.|                      ||.|:..|:.||:.:|..||:|::|||::..:.:||
Zfish   277 HWDGNWL----------------------PHPEEQLFLDQLFIFMQRRGSPISKVPNLGFKKIDL 319

  Fly   329 YRLFRAVQKRGGYNRVTSQNQWKLIAMRLGFTPCTVSVMNLVKQAYKKFLQPYGDFHR------- 386
            :.::..|::.|||:||||...||.:...||.:|.:.|.....::.|::.:.||..:.|       
Zfish   320 FLMYSVVKRLGGYDRVTSHRLWKTVYNELGGSPGSTSAATCTRRHYERLMLPYELYIRGENPELI 384

  Fly   387 ---------------------------------------------------KLGCSMLMTSR--- 397
                                                               |....:|:..|   
Zfish   385 KSRATLVSPTSIKKTVRGKGLSSSPKKNAVTNQGLSPDGAVVVRKRGRPPGKRNAKVLVKGRVGR 449

  Fly   398 --------------------------------NSNRSKGRSLVRANSVASPKPME-----TMKTE 425
                                            |....:|.|||.    ::|:|::     .:|.|
Zfish   450 PPLHPKPPLEKPARPHQEIVQPLTFFQELKLTNHPHGQGLSLVS----STPQPLQPILGRDVKVE 510

  Fly   426 TISKLAQPNQTNVVASTSSSAAAASVAASSTP----------ARAVSTASQSAAEESGNTSESSV 480
            |    |:|...:.::......|..|:...|..          ||.....:...|.:..:.:..::
Zfish   511 T----AEPQAPSFLSVPCKVLAGGSLERFSPTKGLCPLDLFRARLGLNGAHEVAPQDSSINHQTL 571

  Fly   481 VVEP----------PKKQRKG--SAASSQQGKVKS--------------LVEKYEEKSTAVQATS 519
            |.:|          |:.|..|  |..|||.|..::              .::..:...|.:.:|.
Zfish   572 VNQPKVSTPETPESPQHQCSGCCSDPSSQNGAPRAPLPPLRIIPLDIGCSLQLRQLMRTRLGSTH 636

  Fly   520 SGTVAGSGASASAAAMPTTS-------AAASTATNLSSATSGGSATIATTAMNKDAESDLPLAKI 577
            ..|.....:...|..:..||       ...|...|||..|           :.|....|:.|..:
Zfish   637 MNTFTKRLSEVLAQDLNKTSQPNGNVPQEQSLPLNLSRRT-----------ITKRPAGDMELTDL 690

  Fly   578 KAAAVAAASTRHSMEKE----------------TNISSGSSASASSKANSAEMQRSRDAS----P 622
            ::..|.:.:.|..||.|                .|....:..|:.|:|.:....|::.||    |
Zfish   691 QSREVQSGTKRPKMEAEDFGVSVKWNGLSFLVPLNQDEPADLSSPSRARALVQDRNKVASALPEP 755

  Fly   623 S-----------VAAPPSAGAS----------------TSGAAATAQTASNKKEKHQRSKQADKE 660
            :           :..|.|.|||                ||..|.|.           :::|....
Zfish   756 TCFSLVPKSDVPLEIPSSIGASPDTLPCIFQLKQGEDKTSTIAVTV-----------KAEQESTS 809

  Fly   661 KDKDKEEKQASSGK----------RKKEKISVEKIDTGDFV 691
            .|.|.|..|.:|..          ::.:.:|..|:.:..|:
Zfish   810 LDPDLEPPQPNSDLYSQCVPTDDIKESDAVSSLKVLSNSFL 850

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htkNP_573330.3 Tudor_ARID4_rpt1 10..60 CDD:410460
Tudor_ARID4_rpt2 65..118 CDD:410461
RBB1NT 170..263 CDD:462390
ARID 296..381 CDD:460187 28/84 (33%)
CBD_RBP1_like 698..758 CDD:350843
zgc:77151NP_991128.2 ARID_ARID5 287..373 CDD:350633 29/85 (34%)
Blue background indicates that the domain is not in the aligned region.

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